RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PARP1P09874 1014 aaKnown RBP18.61■□□□□ 0.57
VAPA-204ENST00000577901 GOLGA8HP0CJ92 632 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 TXNP10599 105 aaKnown RBP18.61■□□□□ 0.57
VAPA-204ENST00000577901 ACTN1P12814 892 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 MCM5P33992 734 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 RFC2P35250 354 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
VAPA-204ENST00000577901 USH1GQ495M9 461 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 MB21D2Q8IYB1 491 aaPredicted RBP18.61■□□□□ 0.57
VAPA-204ENST00000577901 ADAMTS19Q8TE59 1207 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 MTA3Q9BTC8 594 aa18.61■□□□□ 0.57
VAPA-204ENST00000577901 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
VAPA-204ENST00000577901 REC8O95072 547 aa18.6■□□□□ 0.57
VAPA-204ENST00000577901 PTPN11Q06124 597 aaPredicted RBP18.6■□□□□ 0.57
VAPA-204ENST00000577901 MICALL1Q8N3F8 863 aa18.6■□□□□ 0.57
VAPA-204ENST00000577901 RETREG2Q8NC44 543 aa18.6■□□□□ 0.57
VAPA-204ENST00000577901 RGS22Q8NE09 1264 aa18.6■□□□□ 0.57
VAPA-204ENST00000577901 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
VAPA-204ENST00000577901 TSPYL2Q9H2G4 693 aaPredicted RBP18.6■□□□□ 0.57
VAPA-204ENST00000577901 TRANK1O15050 2925 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 PRC1O43663 620 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 CA3P07451 260 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 IQCF3P0C7M6 154 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 KRT32Q14532 448 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 CATIPQ7Z7H3 387 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 TMTC2Q8N394 836 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 IGDCC4Q8TDY8 1250 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 TMEM87BQ96K49 555 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 UBA5Q9GZZ9 404 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 CPVLQ9H3G5 476 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 NOD1Q9Y239 953 aa18.59■□□□□ 0.57
VAPA-204ENST00000577901 ARIH2O95376 493 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 ANTXR2P58335 489 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 CHMP4BP1P59074 171 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 BFSP2Q13515 415 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 PHOSPHO2Q8TCD6 241 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 NEK1Q96PY6 1258 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
VAPA-204ENST00000577901 UHRF1Q96T88 793 aaPredicted RBP18.58■□□□□ 0.56
VAPA-204ENST00000577901 FTOQ9C0B1 505 aaKnown RBP eCLIP18.58■□□□□ 0.568e-8■□□□□ 8.7
VAPA-204ENST00000577901 SCN10AQ9Y5Y9 1956 aa18.57■□□□□ 0.56
VAPA-204ENST00000577901 DHX16O60231 1041 aaKnown RBP18.57■□□□□ 0.56
VAPA-204ENST00000577901 CCDC62Q6P9F0 684 aa18.57■□□□□ 0.56
VAPA-204ENST00000577901 ABCB11O95342 1321 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 RFXAPO00287 272 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 CDC37Q16543 378 aaPredicted RBP18.56■□□□□ 0.56
VAPA-204ENST00000577901 PTGISQ16647 500 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 SYTL5Q8TDW5 730 aaPredicted RBP18.56■□□□□ 0.56
VAPA-204ENST00000577901 AFG1LQ8WV93 481 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 TBC1D5Q92609 795 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 TAAR1Q96RJ0 339 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 MAF1Q9H063 256 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 CERS4Q9HA82 394 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 SCN5AQ14524 2016 aa18.56■□□□□ 0.56
VAPA-204ENST00000577901 PALM3A6NDB9 673 aaPredicted RBP18.55■□□□□ 0.56
VAPA-204ENST00000577901 CCDC69A6NI79 296 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 KLRF2D3W0D1 207 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
VAPA-204ENST00000577901 GTPBP6O43824 516 aaPredicted RBP18.55■□□□□ 0.56
VAPA-204ENST00000577901 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
VAPA-204ENST00000577901 POU3F3P20264 500 aaPredicted RBP18.55■□□□□ 0.56
VAPA-204ENST00000577901 COL9A1P20849 921 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 ARHGAP1Q07960 439 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 LY6KQ17RY6 165 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 SEPT14Q6ZU15 432 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 HERC6Q8IVU3 1022 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 NSUN6Q8TEA1 469 aaKnown RBP18.55■□□□□ 0.56
VAPA-204ENST00000577901 LY9Q9HBG7 655 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 SENP2Q9HC62 589 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 VAT1LQ9HCJ6 419 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 MAD2L2Q9UI95 211 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
VAPA-204ENST00000577901 KIF28PB7ZC32 967 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 GH1P01241 217 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 MMP3P08254 477 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 HSPA4P34932 840 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 LIFRP42702 1097 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 TFF2Q03403 129 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 TAP1Q03518 808 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 TROAPQ12815 778 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 GRM4Q14833 912 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 SKIV2LQ15477 1246 aaKnown RBP18.54■□□□□ 0.56
VAPA-204ENST00000577901 STXBP2Q15833 593 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
VAPA-204ENST00000577901 DHX32Q7L7V1 743 aaKnown RBP18.54■□□□□ 0.56
VAPA-204ENST00000577901 MCF2L2Q86YR7 1114 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 RASEFQ8IZ41 740 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 CCDC155Q8N6L0 562 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 ARNTL2Q8WYA1 636 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 IWS1Q96ST2 819 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 MAP3K14Q99558 947 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 COL20A1Q9P218 1284 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms