RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.36
CCNDBP1-213ENST00000568507 PPP1R13LQ8WUF5 828 aa17.33■□□□□ 0.36
CCNDBP1-213ENST00000568507 PIBF1Q8WXW3 757 aa17.33■□□□□ 0.36
CCNDBP1-213ENST00000568507 PDCD2LQ9BRP1 358 aa17.33■□□□□ 0.36
CCNDBP1-213ENST00000568507 WNT8AQ9H1J5 351 aa17.33■□□□□ 0.36
CCNDBP1-213ENST00000568507 MSRAQ9UJ68 235 aa17.33■□□□□ 0.36
CCNDBP1-213ENST00000568507 PRC1O43663 620 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 KIF5BP33176 963 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 MCM5P33992 734 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 DGKDQ16760 1214 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 KCNV1Q6PIU1 500 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 FCHSD1Q86WN1 690 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 DHX37Q8IY37 1157 aaKnown RBP17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 MAP3K14Q99558 947 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 ESYT1Q9BSJ8 1104 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 ZNF576Q9H609 170 aa17.32■□□□□ 0.36
CCNDBP1-213ENST00000568507 CCDC69A6NI79 296 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 ZBBXA8MT70 800 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 CYTH3O43739 400 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 CCND2P30279 289 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 RAB30Q15771 203 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 VSIG10LQ86VR7 867 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 MAFAQ8NHW3 353 aaPredicted RBP17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 EMID1Q96A84 441 aaPredicted RBP17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 PBX4Q9BYU1 374 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 LY9Q9HBG7 655 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
CCNDBP1-213ENST00000568507 SLC27A2O14975 620 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 DDAH1O94760 285 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 PFKMP08237 780 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 RFC2P35250 354 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 PBX2P40425 430 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 GNAQP50148 359 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 BFSP2Q13515 415 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 GRIN2CQ14957 1233 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 PGM5Q15124 567 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 PTGISQ16647 500 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 DEFB128Q7Z7B8 93 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 MYL10Q9BUA6 226 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 CXXC1Q9P0U4 656 aaPredicted RBP17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 SLC4A7Q9Y6M7 1214 aa17.3■□□□□ 0.36
CCNDBP1-213ENST00000568507 ACTN1P12814 892 aa17.29■□□□□ 0.36
CCNDBP1-213ENST00000568507 CREB3L3Q68CJ9 461 aa17.29■□□□□ 0.36
CCNDBP1-213ENST00000568507 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
CCNDBP1-213ENST00000568507 PPTC7Q8NI37 304 aa17.29■□□□□ 0.36
CCNDBP1-213ENST00000568507 KATNAL1Q9BW62 490 aa17.29■□□□□ 0.36
CCNDBP1-213ENST00000568507 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 TGFB3P10600 412 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SMARCA1P28370 1054 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 C7orf31Q8N865 590 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 KAT2BQ92831 832 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 CUL5Q93034 780 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SPZ1Q9BXG8 430 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 FTOQ9C0B1 505 aaKnown RBP eCLIP17.28■□□□□ 0.362e-7■□□□□ 10.2
CCNDBP1-213ENST00000568507 MLXIPQ9HAP2 919 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SORBS3O60504 671 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 RGS20O76081 388 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 GGPS1O95749 300 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 IQCF3P0C7M6 154 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 CALM1P0DP23 149 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 CALM2P0DP24 149 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 CALM3P0DP25 149 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 PSEN2P49810 448 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 CELF3Q5SZQ8 465 aaKnown RBP17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 GDF6Q6KF10 455 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 ZFP91Q96JP5 570 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SPATA33Q96N06 139 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SLC28A3Q9HAS3 691 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 SLC12A7Q9Y666 1083 aa17.28■□□□□ 0.36
CCNDBP1-213ENST00000568507 PPFIA4O75335 1185 aa17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 LIFRP42702 1097 aa17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 MFSD10Q14728 455 aa17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 CAGE1Q8TC20 777 aa17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 GAS2L1Q99501 681 aaPredicted RBP17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.35
CCNDBP1-213ENST00000568507 STAM2O75886 525 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 ZNF286BP0CG31 522 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 ATP2A2P16615 1042 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms