RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 CLEC4DQ8WXI8 215 aa29.31■■■□□ 2.28
CYLD-208ENST00000564634 COPS5Q92905 334 aa29.31■■■□□ 2.28
CYLD-208ENST00000564634 SCN10AQ9Y5Y9 1956 aa29.31■■■□□ 2.28
CYLD-208ENST00000564634 BDP1A6H8Y1 2624 aa29.3■■■□□ 2.28
CYLD-208ENST00000564634 RBM47A0AV96 593 aaKnown RBP29.3■■■□□ 2.28
CYLD-208ENST00000564634 PRC1O43663 620 aa29.3■■■□□ 2.28
CYLD-208ENST00000564634 REC8O95072 547 aa29.3■■■□□ 2.28
CYLD-208ENST00000564634 KCNQ1P51787 676 aa29.3■■■□□ 2.28
CYLD-208ENST00000564634 RNF207Q6ZRF8 634 aa29.3■■■□□ 2.28
CYLD-208ENST00000564634 TMEM87BQ96K49 555 aa29.3■■■□□ 2.28
CYLD-208ENST00000564634 EPOPA6NHQ4 379 aa29.29■■■□□ 2.28
CYLD-208ENST00000564634 ACTN1P12814 892 aa29.29■■■□□ 2.28
CYLD-208ENST00000564634 CHMP4BP1P59074 171 aa29.29■■■□□ 2.28
CYLD-208ENST00000564634 TMTC2Q8N394 836 aa29.29■■■□□ 2.28
CYLD-208ENST00000564634 SENP2Q9HC62 589 aa29.29■■■□□ 2.28
CYLD-208ENST00000564634 LOC102724159A0A0B4J2E5 919 aa29.28■■■□□ 2.28
CYLD-208ENST00000564634 ARHGEF15O94989 841 aa29.28■■■□□ 2.28
CYLD-208ENST00000564634 PWP2Q15269 919 aaKnown RBP29.28■■■□□ 2.28
CYLD-208ENST00000564634 BRDTQ58F21 947 aaPredicted RBP29.28■■■□□ 2.28
CYLD-208ENST00000564634 KRT40Q6A162 431 aa29.28■■■□□ 2.28
CYLD-208ENST00000564634 ADGRF4Q8IZF3 695 aa29.28■■■□□ 2.28
CYLD-208ENST00000564634 FTOQ9C0B1 505 aaKnown RBP eCLIP29.28■■■□□ 2.28
CYLD-208ENST00000564634 CPVLQ9H3G5 476 aa29.28■■■□□ 2.28
CYLD-208ENST00000564634 MTCH2Q9Y6C9 303 aa29.28■■■□□ 2.28
CYLD-208ENST00000564634 WDR19Q8NEZ3 1342 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 GTPBP6O43824 516 aaPredicted RBP29.27■■■□□ 2.28
CYLD-208ENST00000564634 BMP1P13497 986 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 RPS6P62753 249 aaKnown RBP29.27■■■□□ 2.28
CYLD-208ENST00000564634 KRT32Q14532 448 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 CATIPQ7Z7H3 387 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 RASEFQ8IZ41 740 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 STAG2Q8N3U4 1231 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 NEK1Q96PY6 1258 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 SLC9A7Q96T83 725 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 LY9Q9HBG7 655 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 MAD2L2Q9UI95 211 aa29.27■■■□□ 2.28
CYLD-208ENST00000564634 NCOR1O75376 2440 aa29.26■■■□□ 2.28
CYLD-208ENST00000564634 PALM3A6NDB9 673 aaPredicted RBP29.26■■■□□ 2.27
CYLD-208ENST00000564634 KLRF2D3W0D1 207 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 RFC2P35250 354 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 GRM4Q14833 912 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 NFRKBQ6P4R8 1299 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 RETREG2Q8NC44 543 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 SCFD2Q8WU76 684 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 ARNTL2Q8WYA1 636 aa29.26■■■□□ 2.27
CYLD-208ENST00000564634 PRRC2BQ5JSZ5 2229 aaKnown RBP29.26■■■□□ 2.27
CYLD-208ENST00000564634 NKRFO15226 690 aaKnown RBP eCLIP29.25■■■□□ 2.27
CYLD-208ENST00000564634 EPB41L2O43491 1005 aaKnown RBP29.25■■■□□ 2.27
CYLD-208ENST00000564634 IQCF3P0C7M6 154 aa29.25■■■□□ 2.27
CYLD-208ENST00000564634 TROAPQ12815 778 aa29.25■■■□□ 2.27
CYLD-208ENST00000564634 AAK1Q2M2I8 961 aa29.25■■■□□ 2.27
CYLD-208ENST00000564634 KCNB2Q92953 911 aa29.25■■■□□ 2.27
CYLD-208ENST00000564634 MPHOSPH6Q99547 160 aaKnown RBP29.25■■■□□ 2.27
CYLD-208ENST00000564634 NOD1Q9Y239 953 aa29.25■■■□□ 2.27
CYLD-208ENST00000564634 PITPNM1O00562 1244 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 SH2B2O14492 632 aaPredicted RBP29.24■■■□□ 2.27
CYLD-208ENST00000564634 DHX16O60231 1041 aaKnown RBP29.24■■■□□ 2.27
CYLD-208ENST00000564634 ARIH2O95376 493 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 EDNRBP24530 442 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 HSPA4P34932 840 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 LIFRP42702 1097 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 TAP1Q03518 808 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 COL9A3Q14050 684 aaPredicted RBP29.24■■■□□ 2.27
CYLD-208ENST00000564634 USH1GQ495M9 461 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 MAP3K14Q99558 947 aa29.24■■■□□ 2.27
CYLD-208ENST00000564634 COL4A4P53420 1690 aaPredicted RBP29.24■■■□□ 2.27
CYLD-208ENST00000564634 A6NJR5 290 aa29.23■■■□□ 2.27
CYLD-208ENST00000564634 TXNP10599 105 aaKnown RBP29.23■■■□□ 2.27
CYLD-208ENST00000564634 CDC37Q16543 378 aaPredicted RBP29.23■■■□□ 2.27
CYLD-208ENST00000564634 HERC6Q8IVU3 1022 aa29.23■■■□□ 2.27
CYLD-208ENST00000564634 JMJD4Q9H9V9 463 aa29.23■■■□□ 2.27
CYLD-208ENST00000564634 VAT1LQ9HCJ6 419 aa29.23■■■□□ 2.27
CYLD-208ENST00000564634 CCDC69A6NI79 296 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 KPNA6O60684 536 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 BFSP2Q13515 415 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 ADCK5Q3MIX3 580 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 NFXL1Q6ZNB6 911 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 DHX32Q7L7V1 743 aaKnown RBP29.22■■■□□ 2.27
CYLD-208ENST00000564634 SPRED2Q7Z698 418 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 ZNF654Q8IZM8 581 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 DNERQ8NFT8 737 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 PHOSPHO2Q8TCD6 241 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 PTPRSQ13332 1948 aa29.22■■■□□ 2.27
CYLD-208ENST00000564634 TET1Q8NFU7 2136 aa29.21■■■□□ 2.27
CYLD-208ENST00000564634 DDAH1O94760 285 aa29.21■■■□□ 2.27
CYLD-208ENST00000564634 HMGB1P09429 215 aaKnown RBP29.21■■■□□ 2.27
CYLD-208ENST00000564634 EXOSC10Q01780 885 aaKnown RBP29.21■■■□□ 2.27
CYLD-208ENST00000564634 POU3F3P20264 500 aaPredicted RBP29.2■■■□□ 2.26
CYLD-208ENST00000564634 PTPN11Q06124 597 aaPredicted RBP29.2■■■□□ 2.26
CYLD-208ENST00000564634 QRICH1Q2TAL8 776 aa29.2■■■□□ 2.26
CYLD-208ENST00000564634 LRRC2Q9BYS8 371 aa29.2■■■□□ 2.26
CYLD-208ENST00000564634 MYH6P13533 1939 aa29.2■■■□□ 2.26
CYLD-208ENST00000564634 KIF28PB7ZC32 967 aa29.19■■■□□ 2.26
CYLD-208ENST00000564634 PTGISQ16647 500 aa29.19■■■□□ 2.26
CYLD-208ENST00000564634 CTCFLQ8NI51 663 aaPredicted RBP29.19■■■□□ 2.26
CYLD-208ENST00000564634 AFG1LQ8WV93 481 aa29.19■■■□□ 2.26
CYLD-208ENST00000564634 MTMR8Q96EF0 704 aa29.19■■■□□ 2.26
CYLD-208ENST00000564634 RIOX1Q9H6W3 641 aa29.19■■■□□ 2.26
CYLD-208ENST00000564634 SNX14Q9Y5W7 946 aa29.19■■■□□ 2.26
CYLD-208ENST00000564634 TLL1O43897 1013 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms