RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 CDH23Q9H251 3354 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 B4E1Z4 1266 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 CA3P07451 260 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 TGFB3P10600 412 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 SKIV2LQ15477 1246 aaKnown RBP16.55■□□□□ 0.24
TPCN1-213ENST00000550543 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 LRRC8DQ7L1W4 858 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 RUFY2Q8WXA3 655 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 COPS5Q92905 334 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 TAAR1Q96RJ0 339 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 LCTP09848 1927 aa16.55■□□□□ 0.24
TPCN1-213ENST00000550543 EMSYQ7Z589 1322 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 ABHD14A-ACY1A0A1B0GW23 586 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 ERICH2A1L162 156 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 TLL1O43897 1013 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 NR3C2P08235 984 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 GHRHRQ02643 423 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
TPCN1-213ENST00000550543 CNKSR3Q6P9H4 555 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
TPCN1-213ENST00000550543 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 ZBED2Q9BTP6 218 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 JMJD4Q9H9V9 463 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 PXMP2Q9NR77 195 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 LMCD1Q9NZU5 365 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 GTF2IRD1Q9UHL9 959 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
TPCN1-213ENST00000550543 NCOR1O75376 2440 aa16.54■□□□□ 0.24
TPCN1-213ENST00000550543 ZBTB5O15062 677 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 ARIH2O95376 493 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 CFBP00751 764 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 HSD17B4P51659 736 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 PTK7Q13308 1070 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 LY6KQ17RY6 165 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 CHST3Q7LGC8 479 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 VWCEQ96DN2 955 aa16.53■□□□□ 0.24
TPCN1-213ENST00000550543 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
TPCN1-213ENST00000550543 KLRF2D3W0D1 207 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 STAM2O75886 525 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 F2P00734 622 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 CXCL10P02778 98 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 MYOGP15173 224 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.24
TPCN1-213ENST00000550543 PSEN2P49810 448 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 IKBKEQ14164 716 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 MFSD10Q14728 455 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 GNPTABQ3T906 1256 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 C1QTNF1Q9BXJ1 281 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 VAT1LQ9HCJ6 419 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 MTCH2Q9Y6C9 303 aa16.52■□□□□ 0.24
TPCN1-213ENST00000550543 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
TPCN1-213ENST00000550543 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 HOXD8P13378 290 aaPredicted RBP16.51■□□□□ 0.23
TPCN1-213ENST00000550543 CCND2P30279 289 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 TAP1Q03518 808 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 GDF6Q6KF10 455 aaPredicted RBP16.51■□□□□ 0.23
TPCN1-213ENST00000550543 STOX1Q6ZVD7 989 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 ARNTL2Q8WYA1 636 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 KAT2BQ92831 832 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
TPCN1-213ENST00000550543 CAND2O75155 1236 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 GNAT1P11488 350 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 CKBP12277 381 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
TPCN1-213ENST00000550543 KIAA0753Q2KHM9 967 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 RALYLQ86SE5 291 aaKnown RBP16.5■□□□□ 0.23
TPCN1-213ENST00000550543 VSIG10LQ86VR7 867 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 MTMR8Q96EF0 704 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 SPATA33Q96N06 139 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 RAD9AQ99638 391 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 PDCD2LQ9BRP1 358 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 COL20A1Q9P218 1284 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 HDAC6Q9UBN7 1215 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 PRUNE2Q8WUY3 3088 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 VCANP13611 3396 aa16.5■□□□□ 0.23
TPCN1-213ENST00000550543 HAS3O00219 553 aa16.49■□□□□ 0.23
TPCN1-213ENST00000550543 MYCLP12524 364 aaPredicted RBP16.49■□□□□ 0.23
TPCN1-213ENST00000550543 CELF3Q5SZQ8 465 aaKnown RBP16.49■□□□□ 0.23
TPCN1-213ENST00000550543 TBC1D5Q92609 795 aa16.49■□□□□ 0.23
TPCN1-213ENST00000550543 HLA-CQ95604 372 aa16.49■□□□□ 0.23
TPCN1-213ENST00000550543 ALG1Q9BT22 464 aa16.49■□□□□ 0.23
TPCN1-213ENST00000550543 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
TPCN1-213ENST00000550543 LAMA4Q16363 1823 aa16.49■□□□□ 0.23
TPCN1-213ENST00000550543 TANC1Q9C0D5 1861 aa16.48■□□□□ 0.23
TPCN1-213ENST00000550543 PALM3A6NDB9 673 aaPredicted RBP16.48■□□□□ 0.23
TPCN1-213ENST00000550543 GJB5O95377 273 aa16.48■□□□□ 0.23
TPCN1-213ENST00000550543 NEDD9Q14511 834 aa16.48■□□□□ 0.23
TPCN1-213ENST00000550543 MYSM1Q5VVJ2 828 aa16.48■□□□□ 0.23
TPCN1-213ENST00000550543 XRRA1Q6P2D8 792 aa16.48■□□□□ 0.23
TPCN1-213ENST00000550543 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
TPCN1-213ENST00000550543 EYSQ5T1H1 3165 aa16.48■□□□□ 0.23
TPCN1-213ENST00000550543 PNMA6FA0A0J9YX94 578 aa16.47■□□□□ 0.23
TPCN1-213ENST00000550543 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
TPCN1-213ENST00000550543 IFIT3O14879 490 aaKnown RBP16.47■□□□□ 0.23
TPCN1-213ENST00000550543 LGR5O75473 907 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms