RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 DGKDQ16760 1214 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 SLC35G1Q2M3R5 365 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 OTOP2Q7RTS6 562 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 CTCFLQ8NI51 663 aaPredicted RBP18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 SCLYQ96I15 445 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 MTA3Q9BTC8 594 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 ZNF576Q9H609 170 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 BAZ2BQ9UIF8 2168 aaKnown RBP18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 DLL1O00548 723 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 PFKMP08237 780 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 KIF5BP33176 963 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 MCM5P33992 734 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 LAMC2Q13753 1193 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 RETREG2Q8NC44 543 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 MAFAQ8NHW3 353 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 PPP1R13LQ8WUF5 828 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 EMID1Q96A84 441 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 MAP3K14Q99558 947 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 ESYT1Q9BSJ8 1104 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 PBX4Q9BYU1 374 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 LY9Q9HBG7 655 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 CXXC1Q9P0U4 656 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 MSRAQ9UJ68 235 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 CDH23Q9H251 3354 aa18.74■□□□□ 0.59
CLSTN3-204ENST00000535313 KIAA1217Q5T5P2 1943 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 PRC1O43663 620 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 DDAH1O94760 285 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 PBX2P40425 430 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 BFSP2Q13515 415 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 PGM5Q15124 567 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 RAB30Q15771 203 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 VSIG10LQ86VR7 867 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 ZNF654Q8IZM8 581 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 TMTC2Q8N394 836 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 PIBF1Q8WXW3 757 aa18.73■□□□□ 0.59
CLSTN3-204ENST00000535313 CUL9Q8IWT3 2517 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 ZBBXA8MT70 800 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 SLC27A2O14975 620 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 CCND2P30279 289 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 RFC2P35250 354 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 GNAQP50148 359 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 GRIN2CQ14957 1233 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 PTGISQ16647 500 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 CENPQQ7L2Z9 268 aaPredicted RBP18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 DEFB128Q7Z7B8 93 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 PPTC7Q8NI37 304 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 RRP36Q96EU6 259 aaKnown RBP18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 TMEM87BQ96K49 555 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 LZTS2Q9BRK4 669 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 MYL10Q9BUA6 226 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 KATNAL1Q9BW62 490 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 SLC4A7Q9Y6M7 1214 aa18.72■□□□□ 0.59
CLSTN3-204ENST00000535313 UNC80Q8N2C7 3258 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 ACTN1P12814 892 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 BMP2KLQ5H9B9 411 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 CREB3L3Q68CJ9 461 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 SESTD1Q86VW0 696 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 CCDC155Q8N6L0 562 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 KAT2BQ92831 832 aa18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
CLSTN3-204ENST00000535313 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 RGS20O76081 388 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 IQCF3P0C7M6 154 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 TGFB3P10600 412 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 C7orf31Q8N865 590 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 SPATA33Q96N06 139 aa18.7■□□□□ 0.58
CLSTN3-204ENST00000535313 GGPS1O95749 300 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 CALM1P0DP23 149 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 CALM2P0DP24 149 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 CALM3P0DP25 149 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 PSEN2P49810 448 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 MFSD10Q14728 455 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 GNPTABQ3T906 1256 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 CELF3Q5SZQ8 465 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 GDF6Q6KF10 455 aaPredicted RBP18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 CAGE1Q8TC20 777 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 CUL5Q93034 780 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 VWCEQ96DN2 955 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 FTOQ9C0B1 505 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 SLC28A3Q9HAS3 691 aa18.69■□□□□ 0.58
CLSTN3-204ENST00000535313 SORBS3O60504 671 aa18.68■□□□□ 0.58
CLSTN3-204ENST00000535313 PPFIA4O75335 1185 aa18.68■□□□□ 0.58
CLSTN3-204ENST00000535313 STAM2O75886 525 aa18.68■□□□□ 0.58
CLSTN3-204ENST00000535313 F2P00734 622 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms