RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CCND2P30279 289 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 AP3B2Q13367 1082 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 LRRC41Q15345 812 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 CCDC62Q6P9F0 684 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 DIS3LQ8TF46 1054 aaKnown RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 PGBD1Q96JS3 809 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 ANO3Q9BYT9 981 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 WDR11Q9BZH6 1224 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 UPF3AQ9H1J1 476 aaKnown RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 MKI67P46013 3256 aaKnown RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 GNA11P29992 359 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 MCM2P49736 904 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 NLRP5P59047 1200 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
SSBP3-214ENST00000533209 NPY5RQ15761 445 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 DUSP28Q4G0W2 176 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
SSBP3-214ENST00000533209 ARRDC4Q8NCT1 418 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 LLPHQ9BRT6 129 aaKnown RBP13.73□□□□□ -0.21
SSBP3-214ENST00000533209 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 GJB4Q9NTQ9 266 aa13.73□□□□□ -0.21
SSBP3-214ENST00000533209 MYADML2A6NDP7 307 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 DNM1LO00429 736 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 CTAGE5O15320 804 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 STAM2O75886 525 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 TXNP10599 105 aaKnown RBP13.72□□□□□ -0.21
SSBP3-214ENST00000533209 COL6A1P12109 1028 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 GJA9P57773 515 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 NKX3-2P78367 333 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 TLK2Q86UE8 772 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 DAGLBQ8NCG7 672 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 KLHDC9Q8NEP7 349 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 BICD2Q8TD16 824 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 WASF1Q92558 559 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 COPS5Q92905 334 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
SSBP3-214ENST00000533209 INPP4AQ96PE3 977 aaPredicted RBP13.72□□□□□ -0.21
SSBP3-214ENST00000533209 PHF20Q9BVI0 1012 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 PCDHA4Q9UN74 947 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 KCNJ14Q9UNX9 436 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 Q9Y3F1 56 aa13.72□□□□□ -0.21
SSBP3-214ENST00000533209 M0R2N6 131 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSBP3-214ENST00000533209 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-214ENST00000533209 CST5P28325 142 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-214ENST00000533209 SREBF1P36956 1147 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 TTLL4Q14679 1199 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 LY6KQ17RY6 165 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 MCTP2Q6DN12 878 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 CCSAPQ6IQ19 270 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-214ENST00000533209 GALNT17Q6IS24 598 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 RNF180Q86T96 592 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 BLIDQ8IZY5 108 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 CRYGNQ8WXF5 182 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 RTEL1Q9NZ71 1219 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
SSBP3-214ENST00000533209 UBIAD1Q9Y5Z9 338 aa13.71□□□□□ -0.21
SSBP3-214ENST00000533209 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 KBTBD13C9JR72 458 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-214ENST00000533209 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-214ENST00000533209 XBP1P17861 261 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 ITGB5P18084 799 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 ICAM3P32942 547 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 KCNV1Q6PIU1 500 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 NECAB2Q7Z6G3 386 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
SSBP3-214ENST00000533209 AP5M1Q9H0R1 490 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 C11orf49Q9H6J7 331 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 PHF24Q9UPV7 400 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
SSBP3-214ENST00000533209 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 TGFB3P10600 412 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
SSBP3-214ENST00000533209 BEX3Q00994 111 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 SP2Q02086 613 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 KCNA10Q16322 511 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
SSBP3-214ENST00000533209 GNPTABQ3T906 1256 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 OR6J1Q8NGC5 347 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 GPRASP2Q96D09 838 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
SSBP3-214ENST00000533209 FIBPO43427 364 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms