RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 USP38Q8NB14 1042 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 ARRDC4Q8NCT1 418 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CHST13Q8NET6 341 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 FERMT2Q96AC1 680 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 C8orf76Q96K31 380 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 FAM161BQ96MY7 647 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 MMP19Q99542 508 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CDX2Q99626 313 aaPredicted RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 KIF2CQ99661 725 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 NAP1L4Q99733 375 aaKnown RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 MYL10Q9BUA6 226 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 UPF3AQ9H1J1 476 aaKnown RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 SEMA6BQ9H3T3 888 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 SLC38A10Q9HBR0 1119 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 C6orf50Q9HD87 102 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 XPNPEP3Q9NQH7 507 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 SH3GLB2Q9NR46 395 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 MAP3K20Q9NYL2 800 aaKnown RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 MAD2L2Q9UI95 211 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CCPG1Q9ULG6 757 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 TPCN1Q9ULQ1 816 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 TAF6LQ9Y6J9 622 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 DDX49Q9Y6V7 483 aaKnown RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 C5orf42Q9H799 3197 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 GRIN2DO15399 1336 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 SYNGAP1Q96PV0 1343 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 MYH7BA7E2Y1 1941 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 SPDYE3A6NKU9 549 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 KBTBD13C9JR72 458 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 PRPF3O43395 683 aaKnown RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ICAM1P05362 532 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 GOLGA8HP0CJ92 632 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 RXRAP19793 462 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ADCY7P51828 1080 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ACLYP53396 1101 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 KCTD2Q14681 263 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ME3Q16798 604 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 PFKFB3Q16875 520 aaPredicted RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 TMEM63BQ5T3F8 832 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 SNRNP48Q6IEG0 339 aaKnown RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 CCDC174Q6PII3 467 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ZNF467Q7Z7K2 595 aaPredicted RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 CCDC82Q8N4S0 544 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 FAM133AQ8N9E0 248 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 SLC43A3Q8NBI5 491 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 SMARCC2Q8TAQ2 1214 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 MYLIPQ8WY64 445 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ALG1Q9BT22 464 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 RANBP17Q9H2T7 1088 aaKnown RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 RIOX1Q9H6W3 641 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 ACAD9Q9H845 621 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 VAT1LQ9HCJ6 419 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 TCEAL9Q9UHQ7 104 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 BRPF3Q9ULD4 1205 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 PRR12Q9ULL5 1215 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 RBM19Q9Y4C8 960 aaKnown RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 PCDHA1Q9Y5I3 950 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 V9GY48 417 aaPredicted RBP5.48□□□□□ -1.53
SSBP3-213ENST00000530618 CNTNAP5Q8WYK1 1306 aa5.48□□□□□ -1.53
SSBP3-213ENST00000530618 DOCK5Q9H7D0 1870 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 ESYT2A0FGR8 921 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 SOWAHBA6NEL2 793 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 GCOM1H8Y6P7 765 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 RBAK-RBAKDNI3L0D1 243 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 DUSP11O75319 330 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 FOSP01100 380 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CD4P01730 458 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CLTBP09497 229 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 POLR2MP0CAP2 368 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 RARBP10826 455 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 ALAS1P13196 640 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 AKR1A1P14550 325 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 GJB2P29033 226 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 ADD1P35611 737 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 KRT2P35908 639 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 SLC16A2P36021 539 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 SLC4A3P48751 1232 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 GJA9P57773 515 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 NUCB2P80303 420 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CNTN2Q02246 1040 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 AP3B2Q13367 1082 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CUL4AQ13619 759 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CSPP1Q1MSJ5 1256 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 QRICH1Q2TAL8 776 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 USH1GQ495M9 461 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 LARP1BQ659C4 914 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 RAB11FIP4Q86YS3 637 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CPXCR1Q8N123 301 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 ANKRD35Q8N283 1001 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 SRBD1Q8N5C6 995 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 MSL3Q8N5Y2 521 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 NECAB1Q8N987 351 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 NSUN7Q8NE18 718 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 PIBF1Q8WXW3 757 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 DDX11Q96FC9 970 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 TOX2Q96NM4 488 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 IPO9Q96P70 1041 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 LBHD1Q9BQE6 289 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms