RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 KIAA1217Q5T5P2 1943 aa20.55■□□□□ 0.88
CMTM1-213ENST00000529506 DDAH1O94760 285 aa20.54■□□□□ 0.88
CMTM1-213ENST00000529506 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
CMTM1-213ENST00000529506 RFC2P35250 354 aa20.54■□□□□ 0.88
CMTM1-213ENST00000529506 BFSP2Q13515 415 aa20.54■□□□□ 0.88
CMTM1-213ENST00000529506 RAB30Q15771 203 aa20.54■□□□□ 0.88
CMTM1-213ENST00000529506 TIFAQ96CG3 184 aa20.54■□□□□ 0.88
CMTM1-213ENST00000529506 PITPNM1O00562 1244 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 OPLAHO14841 1288 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 PPP1R11O60927 126 aaPredicted RBP20.53■□□□□ 0.88
CMTM1-213ENST00000529506 MMP3P08254 477 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CALM1P0DP23 149 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CALM2P0DP24 149 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CALM3P0DP25 149 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CCND2P30279 289 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 RNF20Q5VTR2 975 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 NFXL1Q6ZNB6 911 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CENPQQ7L2Z9 268 aaPredicted RBP20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 RRP36Q96EU6 259 aaKnown RBP20.53■□□□□ 0.88
CMTM1-213ENST00000529506 ESYT1Q9BSJ8 1104 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 KATNAL1Q9BW62 490 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 ZNF576Q9H609 170 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 MYO9BQ13459 2157 aa20.53■□□□□ 0.88
CMTM1-213ENST00000529506 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 STAM2O75886 525 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 CYP2C9P11712 490 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 ACTN1P12814 892 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 ANTXR2P58335 489 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 CHMP4BP1P59074 171 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 PGM5Q15124 567 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 OTOP2Q7RTS6 562 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 ZNF654Q8IZM8 581 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 LSG1Q9H089 658 aaKnown RBP20.52■□□□□ 0.88
CMTM1-213ENST00000529506 WNT8AQ9H1J5 351 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 SENP2Q9HC62 589 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
CMTM1-213ENST00000529506 SLC4A7Q9Y6M7 1214 aa20.52■□□□□ 0.88
CMTM1-213ENST00000529506 UMODL1Q5DID0 1318 aa20.52■□□□□ 0.87
CMTM1-213ENST00000529506 DLL1O00548 723 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 PRC1O43663 620 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 CYTH3O43739 400 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 FOSL2P15408 326 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 HOXA13P31271 388 aaPredicted RBP20.51■□□□□ 0.87
CMTM1-213ENST00000529506 LIFRP42702 1097 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 PTGISQ16647 500 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 SESTD1Q86VW0 696 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 FCHSD1Q86WN1 690 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 CUL5Q93034 780 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 TAF6LQ9Y6J9 622 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 MYH7BA7E2Y1 1941 aa20.51■□□□□ 0.87
CMTM1-213ENST00000529506 SLC27A2O14975 620 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 PARNO95453 639 aaKnown RBP20.5■□□□□ 0.87
CMTM1-213ENST00000529506 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 C7orf31Q8N865 590 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 MAFAQ8NHW3 353 aaPredicted RBP20.5■□□□□ 0.87
CMTM1-213ENST00000529506 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 SCLYQ96I15 445 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 PBX4Q9BYU1 374 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 ANO2Q9NQ90 1003 aa20.5■□□□□ 0.87
CMTM1-213ENST00000529506 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
CMTM1-213ENST00000529506 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
CMTM1-213ENST00000529506 CREB3L3Q68CJ9 461 aa20.49■□□□□ 0.87
CMTM1-213ENST00000529506 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
CMTM1-213ENST00000529506 MLXIPQ9HAP2 919 aa20.49■□□□□ 0.87
CMTM1-213ENST00000529506 SLC28A3Q9HAS3 691 aa20.49■□□□□ 0.87
CMTM1-213ENST00000529506 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
CMTM1-213ENST00000529506 COL6A3P12111 3177 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 LAMA2P24043 3122 aaKnown RBP20.48■□□□□ 0.87
CMTM1-213ENST00000529506 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 GRXCR1A8MXD5 290 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 GRIN2CQ14957 1233 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 SLC35G1Q2M3R5 365 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 XRRA1Q6P2D8 792 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 SMARCC2Q8TAQ2 1214 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 SPATA33Q96N06 139 aa20.48■□□□□ 0.87
CMTM1-213ENST00000529506 GAS2L1Q99501 681 aaPredicted RBP20.48■□□□□ 0.87
CMTM1-213ENST00000529506 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
CMTM1-213ENST00000529506 CXXC1Q9P0U4 656 aaPredicted RBP20.48■□□□□ 0.87
CMTM1-213ENST00000529506 SH2B2O14492 632 aaPredicted RBP20.47■□□□□ 0.87
CMTM1-213ENST00000529506 PSEN2P49810 448 aa20.47■□□□□ 0.87
CMTM1-213ENST00000529506 NEDD9Q14511 834 aa20.47■□□□□ 0.87
CMTM1-213ENST00000529506 DEFB128Q7Z7B8 93 aa20.47■□□□□ 0.87
CMTM1-213ENST00000529506 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.47■□□□□ 0.87
CMTM1-213ENST00000529506 AFAP1L1Q8TED9 768 aa20.47■□□□□ 0.87
CMTM1-213ENST00000529506 PIBF1Q8WXW3 757 aa20.47■□□□□ 0.87
CMTM1-213ENST00000529506 KAT2BQ92831 832 aa20.47■□□□□ 0.87
CMTM1-213ENST00000529506 RGS20O76081 388 aa20.46■□□□□ 0.87
CMTM1-213ENST00000529506 GGPS1O95749 300 aa20.46■□□□□ 0.87
CMTM1-213ENST00000529506 HOXD8P13378 290 aaPredicted RBP20.46■□□□□ 0.87
CMTM1-213ENST00000529506 PBX2P40425 430 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 902.3 ms