RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 GTPBP6O43824 516 aaPredicted RBP10.97□□□□□ -0.65
SDC2-207ENST00000522911 KDM4AO75164 1064 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 F2P00734 622 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 CA3P07451 260 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 TGFB3P10600 412 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 SELPP16109 830 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 NUCB1Q02818 461 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 TAP1Q03518 808 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 TRAF1Q13077 416 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 LAMC2Q13753 1193 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 GPNMBQ14956 572 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 PTGISQ16647 500 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 QRICH1Q2TAL8 776 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 PPTC7Q8NI37 304 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
SDC2-207ENST00000522911 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 KRT23Q9C075 422 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 LNPKQ9C0E8 428 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 RWDD1Q9H446 243 aaPredicted RBP10.97□□□□□ -0.65
SDC2-207ENST00000522911 KAT14Q9H8E8 782 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 JMJD4Q9H9V9 463 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 ZSWIM5Q9P217 1185 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 COL20A1Q9P218 1284 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 CTNNA3Q9UI47 895 aa10.97□□□□□ -0.65
SDC2-207ENST00000522911 DDX41Q9UJV9 622 aaKnown RBP10.97□□□□□ -0.65
SDC2-207ENST00000522911 ABHD14A-ACY1A0A1B0GW23 586 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 OPLAHO14841 1288 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 PPFIA4O75335 1185 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 PARP1P09874 1014 aaKnown RBP10.96□□□□□ -0.65
SDC2-207ENST00000522911 GOLGA8HP0CJ92 632 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 MYOGP15173 224 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 HOXC8P31273 242 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 PTK7Q13308 1070 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 IMMTQ16891 758 aaKnown RBP10.96□□□□□ -0.65
SDC2-207ENST00000522911 USH1GQ495M9 461 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 FAM47CQ5HY64 1035 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 GDF6Q6KF10 455 aaPredicted RBP10.96□□□□□ -0.65
SDC2-207ENST00000522911 CNKSR3Q6P9H4 555 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 DEFB128Q7Z7B8 93 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 FBXO11Q86XK2 927 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 TBC1D5Q92609 795 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 RILPL2Q969X0 211 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 TAAR1Q96RJ0 339 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 UBA5Q9GZZ9 404 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 PXMP2Q9NR77 195 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
SDC2-207ENST00000522911 NR3C2P08235 984 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 WDR5P61964 334 aaKnown RBP10.95□□□□□ -0.66
SDC2-207ENST00000522911 SEC23AQ15436 765 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 CCDC85BQ15834 202 aaPredicted RBP10.95□□□□□ -0.66
SDC2-207ENST00000522911 LY6KQ17RY6 165 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 MYSM1Q5VVJ2 828 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 LRRC8DQ7L1W4 858 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 VSIG10LQ86VR7 867 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 IL27Q8NEV9 243 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 DHX38Q92620 1227 aaKnown RBP10.95□□□□□ -0.66
SDC2-207ENST00000522911 ZKSCAN3Q9BRR0 538 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 DIAPH3Q9NSV4 1193 aa10.95□□□□□ -0.66
SDC2-207ENST00000522911 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
SDC2-207ENST00000522911 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 PALM3A6NDB9 673 aaPredicted RBP10.94□□□□□ -0.66
SDC2-207ENST00000522911 B4E1Z4 1266 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 ZBTB5O15062 677 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 LPXNO60711 386 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 RGS20O76081 388 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 GJB5O95377 273 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 CKBP12277 381 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 KCNJ6P48051 423 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
SDC2-207ENST00000522911 TRIM71Q2Q1W2 868 aaKnown RBP10.94□□□□□ -0.66
SDC2-207ENST00000522911 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
SDC2-207ENST00000522911 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 RAD9AQ99638 391 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 PDCD2LQ9BRP1 358 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 FTOQ9C0B1 505 aaKnown RBP eCLIP10.94□□□□□ -0.667e-7■■□□□ 13
SDC2-207ENST00000522911 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 RIOX1Q9H6W3 641 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 PRRC2BQ5JSZ5 2229 aaKnown RBP10.94□□□□□ -0.66
SDC2-207ENST00000522911 TET1Q8NFU7 2136 aa10.94□□□□□ -0.66
SDC2-207ENST00000522911 FRMPD4Q14CM0 1322 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 COL4A6Q14031 1691 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 EPOPA6NHQ4 379 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 TLL1O43897 1013 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 NBNO60934 754 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 CAND2O75155 1236 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 STAM2O75886 525 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 COL9A1P20849 921 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 PSEN2P49810 448 aa10.93□□□□□ -0.66
SDC2-207ENST00000522911 ERVK-21P61565 698 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms