RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 PRDM6Q9NQX0 595 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 ERICH2A1L162 156 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 B4E1Z4 1266 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 TNFRSF10AO00220 468 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 IQCF3P0C7M6 154 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 CYP2C9P11712 490 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 RBL2Q08999 1139 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 LAMC2Q13753 1193 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 PTGISQ16647 500 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 CCDC62Q6P9F0 684 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
SKP2-207ENST00000513263 FTOQ9C0B1 505 aaKnown RBP eCLIP12.77□□□□□ -0.37
SKP2-207ENST00000513263 YBX2Q9Y2T7 364 aaKnown RBP12.77□□□□□ -0.37
SKP2-207ENST00000513263 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.37
SKP2-207ENST00000513263 EMSYQ7Z589 1322 aa12.77□□□□□ -0.37
SKP2-207ENST00000513263 NLRC5Q86WI3 1866 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 ZBTB5O15062 677 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 F2P00734 622 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 POU3F3P20264 500 aaPredicted RBP12.76□□□□□ -0.37
SKP2-207ENST00000513263 ARHGAP1Q07960 439 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 SEPT14Q6ZU15 432 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 DEFB128Q7Z7B8 93 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 USP38Q8NB14 1042 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 AFG1LQ8WV93 481 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 PXMP2Q9NR77 195 aa12.76□□□□□ -0.37
SKP2-207ENST00000513263 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
SKP2-207ENST00000513263 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
SKP2-207ENST00000513263 STAM2O75886 525 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 ARIH2O95376 493 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 CFBP00751 764 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 CA3P07451 260 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 TGFB3P10600 412 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 SELPP16109 830 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 PTGS1P23219 599 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 HSD17B4P51659 736 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 GNPTABQ3T906 1256 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 CNKSR3Q6P9H4 555 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
SKP2-207ENST00000513263 ASB2Q96Q27 587 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 UBA5Q9GZZ9 404 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 DOCK5Q9H7D0 1870 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 ZSWIM5Q9P217 1185 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
SKP2-207ENST00000513263 NR3C2P08235 984 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 EIF2AK2P19525 551 aaKnown RBP12.74□□□□□ -0.37
SKP2-207ENST00000513263 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 COPS5Q92905 334 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 TAAR1Q96RJ0 339 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
SKP2-207ENST00000513263 COG5Q9UP83 839 aa12.74□□□□□ -0.37
SKP2-207ENST00000513263 COL4A6Q14031 1691 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 ABHD14A-ACY1A0A1B0GW23 586 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 TLL1O43897 1013 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 CAND2O75155 1236 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 HOXD8P13378 290 aaPredicted RBP12.73□□□□□ -0.37
SKP2-207ENST00000513263 CCND2P30279 289 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 RABGGTBP53611 331 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 PTK7Q13308 1070 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 STOX1Q6ZVD7 989 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
SKP2-207ENST00000513263 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 UHRF1Q96T88 793 aaPredicted RBP12.73□□□□□ -0.37
SKP2-207ENST00000513263 CPVLQ9H3G5 476 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
SKP2-207ENST00000513263 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
SKP2-207ENST00000513263 CXCL10P02778 98 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 POLR2MP0CAP2 368 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 PSEN2P49810 448 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 MFSD10Q14728 455 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 KIAA0753Q2KHM9 967 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
SKP2-207ENST00000513263 PDCD2LQ9BRP1 358 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 LMCD1Q9NZU5 365 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
SKP2-207ENST00000513263 PALM3A6NDB9 673 aaPredicted RBP12.71□□□□□ -0.37
SKP2-207ENST00000513263 NOP56O00567 594 aaKnown RBP12.71□□□□□ -0.37
SKP2-207ENST00000513263 GNAT1P11488 350 aa12.71□□□□□ -0.37
SKP2-207ENST00000513263 CKBP12277 381 aa12.71□□□□□ -0.37
SKP2-207ENST00000513263 WDR5P61964 334 aaKnown RBP12.71□□□□□ -0.37
SKP2-207ENST00000513263 IKBKEQ14164 716 aa12.71□□□□□ -0.37
SKP2-207ENST00000513263 GRM4Q14833 912 aa12.71□□□□□ -0.37
SKP2-207ENST00000513263 WTAPQ15007 396 aa12.71□□□□□ -0.37
SKP2-207ENST00000513263 PGM5Q15124 567 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms