RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
LETM1-207ENST00000512669 SCN5AQ14524 2016 aa16.96■□□□□ 0.3
LETM1-207ENST00000512669 RPS6P62753 249 aaKnown RBP16.95■□□□□ 0.3
LETM1-207ENST00000512669 SLC35G1Q2M3R5 365 aa16.95■□□□□ 0.3
LETM1-207ENST00000512669 CENPQQ7L2Z9 268 aaPredicted RBP16.95■□□□□ 0.3
LETM1-207ENST00000512669 HERC6Q8IVU3 1022 aa16.95■□□□□ 0.3
LETM1-207ENST00000512669 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
LETM1-207ENST00000512669 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
LETM1-207ENST00000512669 FTOQ9C0B1 505 aaKnown RBP eCLIP16.95■□□□□ 0.3
LETM1-207ENST00000512669 E7EWF7 191 aa16.94■□□□□ 0.3
LETM1-207ENST00000512669 TXNP10599 105 aaKnown RBP16.94■□□□□ 0.3
LETM1-207ENST00000512669 PLA2G5P39877 138 aa16.94■□□□□ 0.3
LETM1-207ENST00000512669 KCNJ6P48051 423 aa16.94■□□□□ 0.3
LETM1-207ENST00000512669 AFAP1L1Q8TED9 768 aa16.94■□□□□ 0.3
LETM1-207ENST00000512669 TBC1D5Q92609 795 aa16.94■□□□□ 0.3
LETM1-207ENST00000512669 UBAC1Q9BSL1 405 aa16.94■□□□□ 0.3
LETM1-207ENST00000512669 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
LETM1-207ENST00000512669 RBM8AQ9Y5S9 174 aaKnown RBP16.94■□□□□ 0.3
LETM1-207ENST00000512669 TCF20Q9UGU0 1960 aaKnown RBP16.94■□□□□ 0.3
LETM1-207ENST00000512669 ANTXR2P58335 489 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 TAP1Q03518 808 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 CDC37Q16543 378 aaPredicted RBP16.93■□□□□ 0.3
LETM1-207ENST00000512669 IFIT1BQ5T764 474 aaKnown RBP16.93■□□□□ 0.3
LETM1-207ENST00000512669 CHST3Q7LGC8 479 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 SESTD1Q86VW0 696 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 FAM122AQ96E09 287 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 ESYT1Q9BSJ8 1104 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
LETM1-207ENST00000512669 ARIH1Q9Y4X5 557 aaPredicted RBP16.93■□□□□ 0.3
LETM1-207ENST00000512669 TFF2Q03403 129 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 PTGISQ16647 500 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 MB21D2Q8IYB1 491 aaPredicted RBP16.92■□□□□ 0.3
LETM1-207ENST00000512669 ARNTL2Q8WYA1 636 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 HLA-CQ95604 372 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 LMCD1Q9NZU5 365 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 MAD2L2Q9UI95 211 aa16.92■□□□□ 0.3
LETM1-207ENST00000512669 XIRP2A4UGR9 3374 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 TRANK1O15050 2925 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 PALM3A6NDB9 673 aaPredicted RBP16.91■□□□□ 0.3
LETM1-207ENST00000512669 TLL1O43897 1013 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 EFCAB14O75071 495 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
LETM1-207ENST00000512669 KCNQ1P51787 676 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 RBL2Q08999 1139 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 USH1GQ495M9 461 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 MTMR8Q96EF0 704 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 ABCB11O95342 1321 aa16.91■□□□□ 0.3
LETM1-207ENST00000512669 TET1Q8NFU7 2136 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 IFIT3O14879 490 aaKnown RBP16.9■□□□□ 0.3
LETM1-207ENST00000512669 PPP1R11O60927 126 aaPredicted RBP16.9■□□□□ 0.3
LETM1-207ENST00000512669 GH1P01241 217 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 SELPP16109 830 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 CASTP20810 708 aaKnown RBP16.9■□□□□ 0.3
LETM1-207ENST00000512669 TRDNQ13061 729 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 NCOA7Q8NI08 942 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 NSUN6Q8TEA1 469 aaKnown RBP16.9■□□□□ 0.3
LETM1-207ENST00000512669 COPS5Q92905 334 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 NECAB3Q96P71 396 aaPredicted RBP16.9■□□□□ 0.3
LETM1-207ENST00000512669 IWS1Q96ST2 819 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
LETM1-207ENST00000512669 TRIP12Q14669 1992 aaPredicted RBP16.89■□□□□ 0.3
LETM1-207ENST00000512669 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 RFXAPO00287 272 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 OPLAHO14841 1288 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 MMP3P08254 477 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 TROAPQ12815 778 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 NECTIN1Q15223 517 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 STXBP2Q15833 593 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 DGKDQ16760 1214 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 CCDC62Q6P9F0 684 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 CNKSR3Q6P9H4 555 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 LRRC8DQ7L1W4 858 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 COL20A1Q9P218 1284 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 HCN4Q9Y3Q4 1203 aa16.89■□□□□ 0.29
LETM1-207ENST00000512669 KIAA1217Q5T5P2 1943 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 ABHD14A-ACY1A0A1B0GW23 586 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 EPOPA6NHQ4 379 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 SLC27A2O14975 620 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 CYTH3O43739 400 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 ARIH2O95376 493 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 WDR5P61964 334 aaKnown RBP16.88■□□□□ 0.29
LETM1-207ENST00000512669 GRB10Q13322 594 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 GRM4Q14833 912 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 EMID1Q96A84 441 aaPredicted RBP16.88■□□□□ 0.29
LETM1-207ENST00000512669 ZBED2Q9BTP6 218 aa16.88■□□□□ 0.29
LETM1-207ENST00000512669 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
LETM1-207ENST00000512669 CXCL10P02778 98 aa16.87■□□□□ 0.29
LETM1-207ENST00000512669 CHMP4BP1P59074 171 aa16.87■□□□□ 0.29
LETM1-207ENST00000512669 ARHGAP1Q07960 439 aa16.87■□□□□ 0.29
LETM1-207ENST00000512669 WTAPQ15007 396 aa16.87■□□□□ 0.29
LETM1-207ENST00000512669 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
LETM1-207ENST00000512669 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms