RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
CTTN-208ENST00000498223 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
CTTN-208ENST00000498223 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
CTTN-208ENST00000498223 FGD4Q96M96 766 aa13.04□□□□□ -0.32
CTTN-208ENST00000498223 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.04□□□□□ -0.32
CTTN-208ENST00000498223 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
CTTN-208ENST00000498223 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
CTTN-208ENST00000498223 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
CTTN-208ENST00000498223 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
CTTN-208ENST00000498223 CENPFP49454 3210 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 M0R2N6 131 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 HMGCRP04035 888 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 CNGA1P29973 690 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 SREBF1P36956 1147 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
CTTN-208ENST00000498223 LETM2Q2VYF4 491 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 IL31RAQ8NI17 732 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 TRIB2Q92519 343 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 MTMR6Q9Y217 621 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 ASTN1O14525 1302 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 SYNGAP1Q96PV0 1343 aa13.03□□□□□ -0.32
CTTN-208ENST00000498223 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.32
CTTN-208ENST00000498223 MARCH6O60337 910 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.335e-19■□□□□ 10.6
CTTN-208ENST00000498223 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 XRRA1Q6P2D8 792 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 BRAPQ7Z569 592 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 NEK8Q86SG6 692 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 NLRX1Q86UT6 975 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
CTTN-208ENST00000498223 TNFRSF25Q93038 417 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 NAP1L4Q99733 375 aaKnown RBP13.02□□□□□ -0.33
CTTN-208ENST00000498223 ABHD16BQ9H3Z7 469 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 BRCA2P51587 3418 aa13.02□□□□□ -0.33
CTTN-208ENST00000498223 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 CCNT1O60563 726 aaKnown RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 STAM2O75886 525 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 SNAI1O95863 264 aaPredicted RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 INHAP05111 366 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 ZSCAN22P10073 491 aaPredicted RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 USP11P51784 963 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 TRIM32Q13049 653 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 EARS2Q5JPH6 523 aaKnown RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 VSIG10LQ86VR7 867 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 PLA2G4DQ86XP0 818 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 ZSCAN16Q9H4T2 348 aaPredicted RBP13.01□□□□□ -0.33
CTTN-208ENST00000498223 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 FRMPD4Q14CM0 1322 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 FRMPD3Q5JV73 1810 aa13.01□□□□□ -0.33
CTTN-208ENST00000498223 CYP3A4P08684 503 aa13□□□□□ -0.33
CTTN-208ENST00000498223 EDNRBP24530 442 aa13□□□□□ -0.33
CTTN-208ENST00000498223 NUCB2P80303 420 aa13□□□□□ -0.33
CTTN-208ENST00000498223 MRPS9P82933 396 aaKnown RBP13□□□□□ -0.33
CTTN-208ENST00000498223 CACNB2Q08289 660 aaPredicted RBP13□□□□□ -0.33
CTTN-208ENST00000498223 PKP1Q13835 747 aa13□□□□□ -0.33
CTTN-208ENST00000498223 PRR16Q569H4 304 aa13□□□□□ -0.33
CTTN-208ENST00000498223 TTC38Q5R3I4 469 aa13□□□□□ -0.33
CTTN-208ENST00000498223 MORC4Q8TE76 937 aa13□□□□□ -0.33
CTTN-208ENST00000498223 MXRA8Q9BRK3 442 aa13□□□□□ -0.33
CTTN-208ENST00000498223 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
CTTN-208ENST00000498223 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
CTTN-208ENST00000498223 KAT6AQ92794 2004 aa13□□□□□ -0.33
CTTN-208ENST00000498223 MKI67P46013 3256 aaKnown RBP12.99□□□□□ -0.33
CTTN-208ENST00000498223 F13A1P00488 732 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 MCM7P33993 719 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 RESTQ13127 1097 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 MTMR1Q13613 665 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 TTLL4Q14679 1199 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 ZNF174Q15697 407 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
CTTN-208ENST00000498223 CEP55Q53EZ4 464 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 RILPL1Q5EBL4 403 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
CTTN-208ENST00000498223 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 GPRASP2Q96D09 838 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 CDHR1Q96JP9 859 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 UIMC1Q96RL1 719 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
CTTN-208ENST00000498223 PDGFCQ9NRA1 345 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
CTTN-208ENST00000498223 FAM184BQ9ULE4 1060 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 UBIAD1Q9Y5Z9 338 aa12.99□□□□□ -0.33
CTTN-208ENST00000498223 FAM86B1E9PN63 330 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 FIBPO43427 364 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms