RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 Q9Y3F1 56 aa14.24□□□□□ -0.13
COL4A5-206ENST00000489230 PCDHA8Q9Y5H6 950 aa14.24□□□□□ -0.13
COL4A5-206ENST00000489230 RBM47A0AV96 593 aaKnown RBP14.23□□□□□ -0.13
COL4A5-206ENST00000489230 NKRFO15226 690 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL4A5-206ENST00000489230 MAFGO15525 162 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 DUSP11O75319 330 aaKnown RBP14.23□□□□□ -0.13
COL4A5-206ENST00000489230 MYCLP12524 364 aaPredicted RBP14.23□□□□□ -0.13
COL4A5-206ENST00000489230 FDPSP14324 419 aaKnown RBP14.23□□□□□ -0.13
COL4A5-206ENST00000489230 TNFAIP2Q03169 654 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 TTLL4Q14679 1199 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 PGM5Q15124 567 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 GNPTABQ3T906 1256 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 PCNX4Q63HM2 1172 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 TRPV1Q8NER1 839 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 SCFD2Q8WU76 684 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 VPS54Q9P1Q0 977 aa14.23□□□□□ -0.13
COL4A5-206ENST00000489230 SMCHD1A6NHR9 2005 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 ASTN1O14525 1302 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 CLK2P49760 499 aaKnown RBP14.22□□□□□ -0.13
COL4A5-206ENST00000489230 SAFBQ15424 915 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL4A5-206ENST00000489230 UBE2SQ16763 222 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 LHX8Q68G74 356 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 TAPT1Q6NXT6 567 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 NECAB2Q7Z6G3 386 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 NLRX1Q86UT6 975 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 DAGLBQ8NCG7 672 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 LRCH3Q96II8 777 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 CDHR1Q96JP9 859 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 WDR11Q9BZH6 1224 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 CRISPLD2Q9H0B8 497 aa14.22□□□□□ -0.13
COL4A5-206ENST00000489230 FRMPD4Q14CM0 1322 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 SOX1O00570 391 aaPredicted RBP14.21□□□□□ -0.13
COL4A5-206ENST00000489230 USP11P51784 963 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 DUSP28Q4G0W2 176 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 BRDTQ58F21 947 aaPredicted RBP14.21□□□□□ -0.13
COL4A5-206ENST00000489230 JAKMIP3Q5VZ66 844 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 EEPD1Q7L9B9 569 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 RNF180Q86T96 592 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 PAWRQ96IZ0 340 aaKnown RBP14.21□□□□□ -0.13
COL4A5-206ENST00000489230 PHF20Q9BVI0 1012 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 AP5M1Q9H0R1 490 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
COL4A5-206ENST00000489230 ZEB2O60315 1214 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 JAK2O60674 1132 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
COL4A5-206ENST00000489230 ZNF76P36508 570 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 SEPT14Q6ZU15 432 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 FBXO16Q8IX29 292 aaPredicted RBP14.2□□□□□ -0.14
COL4A5-206ENST00000489230 GIMAP8Q8ND71 665 aaPredicted RBP14.2□□□□□ -0.14
COL4A5-206ENST00000489230 INTS4Q96HW7 963 aaKnown RBP14.2□□□□□ -0.14
COL4A5-206ENST00000489230 C8orf76Q96K31 380 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 ANO3Q9BYT9 981 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 XPNPEP3Q9NQH7 507 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 SMC3Q9UQE7 1217 aa14.2□□□□□ -0.14
COL4A5-206ENST00000489230 PLXNA1Q9UIW2 1896 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 K7ELQ4 463 aaPredicted RBP14.19□□□□□ -0.14
COL4A5-206ENST00000489230 CD2BP2O95400 341 aaKnown RBP14.19□□□□□ -0.14
COL4A5-206ENST00000489230 CYP3A4P08684 503 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 ICAM3P32942 547 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 KRT2P35908 639 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 SREBF1P36956 1147 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 ADCYAP1R1P41586 468 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 CUL4AQ13619 759 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 KRT25Q7Z3Z0 450 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 C7orf61Q8IZ16 206 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 PCSK9Q8NBP7 692 aaKnown RBP14.19□□□□□ -0.14
COL4A5-206ENST00000489230 GPRASP2Q96D09 838 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 NAP1L4Q99733 375 aaKnown RBP14.19□□□□□ -0.14
COL4A5-206ENST00000489230 TSEN34Q9BSV6 310 aaKnown RBP14.19□□□□□ -0.14
COL4A5-206ENST00000489230 PDGFCQ9NRA1 345 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 KCNJ14Q9UNX9 436 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 LAMA3Q16787 3333 aa14.19□□□□□ -0.14
COL4A5-206ENST00000489230 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 SPATA31C2B4DYI2 1134 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 DYNC1LI2O43237 492 aaPredicted RBP14.18□□□□□ -0.14
COL4A5-206ENST00000489230 FIBPO43427 364 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 KPNA6O60684 536 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 MMP1P03956 469 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 PDIA4P13667 645 aaKnown RBP14.18□□□□□ -0.14
COL4A5-206ENST00000489230 SMPD1P17405 629 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 PDCP20941 246 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 GJA9P57773 515 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 NKX3-2P78367 333 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 MRPS9P82933 396 aaKnown RBP14.18□□□□□ -0.14
COL4A5-206ENST00000489230 ARHGAP4P98171 946 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 LAMC2Q13753 1193 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 NEDD9Q14511 834 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 CEP55Q53EZ4 464 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 KRT40Q6A162 431 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 CCDC62Q6P9F0 684 aa14.18□□□□□ -0.14
COL4A5-206ENST00000489230 NIPA1Q7RTP0 329 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms