RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CYB5R4Q7L1T6 521 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 SESTD1Q86VW0 696 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 DHX37Q8IY37 1157 aaKnown RBP16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 C7orf31Q8N865 590 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 PPTC7Q8NI37 304 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 MTMR8Q96EF0 704 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 SCLYQ96I15 445 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 COL20A1Q9P218 1284 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 PCDHA11Q9Y5I1 949 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 GCOM1H8Y6P7 765 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 CCND2P30279 289 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 ARHGAP1Q07960 439 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 PTGISQ16647 500 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 LY6KQ17RY6 165 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 DEFB128Q7Z7B8 93 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 AFAP1L1Q8TED9 768 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 SLC9A7Q96T83 725 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 PDCD2LQ9BRP1 358 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 FTOQ9C0B1 505 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 IL25Q9H293 177 aa16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 CXXC1Q9P0U4 656 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-209ENST00000478349 CUL9Q8IWT3 2517 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 GRXCR1A8MXD5 290 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 E7EWF7 191 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 STAM2O75886 525 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 BAIAP3O94812 1187 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 TGFB3P10600 412 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 PBX2P40425 430 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 GNPTABQ3T906 1256 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 STOX1Q6ZVD7 989 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 PHOSPHO2Q8TCD6 241 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 TBC1D5Q92609 795 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 SEC63Q9UGP8 760 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 DDX41Q9UJV9 622 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-209ENST00000478349 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 DDAH1O94760 285 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 IQCF3P0C7M6 154 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 MYCLP12524 364 aaPredicted RBP16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 KCNJ6P48051 423 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 GNAQP50148 359 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 CUL5Q93034 780 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 COL25A1Q9BXS0 654 aaPredicted RBP16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 PRDM12Q9H4Q4 367 aa16.72■□□□□ 0.27
SMARCE1-209ENST00000478349 F2P00734 622 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 PTH1RQ03431 593 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 PGM5Q15124 567 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 SPATA33Q96N06 139 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 PIGSQ96S52 555 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 GTF2IRD1Q9UHL9 959 aa16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 LAMA2P24043 3122 aaKnown RBP16.71■□□□□ 0.27
SMARCE1-209ENST00000478349 OPLAHO14841 1288 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 PPP1R11O60927 126 aaPredicted RBP16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 EFCAB14O75071 495 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 PPFIA4O75335 1185 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 CALM1P0DP23 149 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 CALM2P0DP24 149 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 CALM3P0DP25 149 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 SELPP16109 830 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 HOXA13P31271 388 aaPredicted RBP16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 PSEN2P49810 448 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 TROAPQ12815 778 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 MFSD10Q14728 455 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 VSIG10LQ86VR7 867 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 FCHSD1Q86WN1 690 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 TMEM87BQ96K49 555 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 MLXIPQ9HAP2 919 aa16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-209ENST00000478349 SCN10AQ9Y5Y9 1956 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 CCDC69A6NI79 296 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 NOP56O00567 594 aaKnown RBP16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 GGPS1O95749 300 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 IGFBP4P22692 258 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 MCM5P33992 734 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 RBL2Q08999 1139 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 PTK7Q13308 1070 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 CELF3Q5SZQ8 465 aaKnown RBP16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 XRRA1Q6P2D8 792 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 LRRC8DQ7L1W4 858 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms