RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 LAMC2Q13753 1193 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 DGKDQ16760 1214 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 TMTC2Q8N394 836 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 PDCD2LQ9BRP1 358 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 DDAH1O94760 285 aa23.58■■□□□ 1.37
PDLIM4-206ENST00000474421 MCM5P33992 734 aa23.58■■□□□ 1.37
PDLIM4-206ENST00000474421 CTCFLQ8NI51 663 aaPredicted RBP23.58■■□□□ 1.37
PDLIM4-206ENST00000474421 MYLIPQ8WY64 445 aa23.58■■□□□ 1.37
PDLIM4-206ENST00000474421 ZNF576Q9H609 170 aa23.58■■□□□ 1.37
PDLIM4-206ENST00000474421 NOD1Q9Y239 953 aa23.58■■□□□ 1.37
PDLIM4-206ENST00000474421 MYH7BA7E2Y1 1941 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 PITPNM1O00562 1244 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 CYTH3O43739 400 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 MYCLP12524 364 aaPredicted RBP23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 FOSL2P15408 326 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 HOXA13P31271 388 aaPredicted RBP23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 RFC2P35250 354 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 BFSP2Q13515 415 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 RAB30Q15771 203 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 SLC35G1Q2M3R5 365 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 OTOP2Q7RTS6 562 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 VSIG10LQ86VR7 867 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 RETREG2Q8NC44 543 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 MAFAQ8NHW3 353 aaPredicted RBP23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 LZTS2Q9BRK4 669 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 ESYT1Q9BSJ8 1104 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 PBX4Q9BYU1 374 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 LSG1Q9H089 658 aaKnown RBP23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 LY9Q9HBG7 655 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 MSRAQ9UJ68 235 aa23.57■■□□□ 1.36
PDLIM4-206ENST00000474421 DLL1O00548 723 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 SMARCA1P28370 1054 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 CCND2P30279 289 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 PGM5Q15124 567 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 SESTD1Q86VW0 696 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 DHX37Q8IY37 1157 aaKnown RBP23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 ZNF654Q8IZM8 581 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 CCDC155Q8N6L0 562 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 PPTC7Q8NI37 304 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 SCLYQ96I15 445 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 TMEM87BQ96K49 555 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 KATNAL1Q9BW62 490 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 SPZ1Q9BXG8 430 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 CXXC1Q9P0U4 656 aaPredicted RBP23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 UNC80Q8N2C7 3258 aa23.56■■□□□ 1.36
PDLIM4-206ENST00000474421 PRC1O43663 620 aa23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 TGFB3P10600 412 aa23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 GNAQP50148 359 aa23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 CHMP4BP1P59074 171 aa23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 CENPQQ7L2Z9 268 aaPredicted RBP23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 SLC4A7Q9Y6M7 1214 aa23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 MYO9BQ13459 2157 aa23.55■■□□□ 1.36
PDLIM4-206ENST00000474421 GRXCR1A8MXD5 290 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 ACTN1P12814 892 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 GRIN2CQ14957 1233 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 PTGISQ16647 500 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 BMP2KLQ5H9B9 411 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 NFXL1Q6ZNB6 911 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 FCHSD1Q86WN1 690 aa23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 RRP36Q96EU6 259 aaKnown RBP23.54■■□□□ 1.36
PDLIM4-206ENST00000474421 EYSQ5T1H1 3165 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 CCDC69A6NI79 296 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 SLC27A2O14975 620 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 STAM2O75886 525 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 CALM1P0DP23 149 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 CALM2P0DP24 149 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 CALM3P0DP25 149 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 PBX2P40425 430 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 CAGE1Q8TC20 777 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 KAT2BQ92831 832 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 ANO2Q9NQ90 1003 aa23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 SEC63Q9UGP8 760 aaKnown RBP23.53■■□□□ 1.36
PDLIM4-206ENST00000474421 TANC1Q9C0D5 1861 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 ZBBXA8MT70 800 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 SH2B2O14492 632 aaPredicted RBP23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 PPFIA4O75335 1185 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 RGS20O76081 388 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 IQCF3P0C7M6 154 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 LIFRP42702 1097 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 GNPTABQ3T906 1256 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 CELF3Q5SZQ8 465 aaKnown RBP23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 RNF20Q5VTR2 975 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 MYSM1Q5VVJ2 828 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 CREB3L3Q68CJ9 461 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 C7orf31Q8N865 590 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 TRIP12Q14669 1992 aaPredicted RBP23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 SCN5AQ14524 2016 aa23.52■■□□□ 1.36
PDLIM4-206ENST00000474421 F2P00734 622 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 HOXD8P13378 290 aaPredicted RBP23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 PSEN2P49810 448 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 NECTIN1Q15223 517 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 DEFB128Q7Z7B8 93 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 IL31RAQ8NI17 732 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 PPP1R13LQ8WUF5 828 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 PIBF1Q8WXW3 757 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 CUL5Q93034 780 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 MYL10Q9BUA6 226 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 GBF1Q92538 1859 aa23.51■■□□□ 1.35
PDLIM4-206ENST00000474421 GGPS1O95749 300 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms