RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 UBE2SQ16763 222 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 MORN1Q5T089 497 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 BRAPQ7Z569 592 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
COL5A3-202ENST00000461214 SYTL5Q8TDW5 730 aaPredicted RBP16.45■□□□□ 0.22
COL5A3-202ENST00000461214 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
COL5A3-202ENST00000461214 APBA2Q99767 749 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 NUDT12Q9BQG2 462 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 ANO3Q9BYT9 981 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 PCDHA6Q9UN73 950 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 PCDHA8Q9Y5H6 950 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 CCDC194A0A1B0GVG4 234 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 BTBD18B2RXH4 712 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 B4DLN1 442 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 POTEB2H3BUK9 544 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 HOXC6P09630 235 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 NONOQ15233 471 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL5A3-202ENST00000461214 NOSTRINQ8IVI9 506 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 GUCD1Q96NT3 240 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 PAK6Q9NQU5 681 aaPredicted RBP16.44■□□□□ 0.22
COL5A3-202ENST00000461214 COL20A1Q9P218 1284 aa16.44■□□□□ 0.22
COL5A3-202ENST00000461214 MYH9P35579 1960 aaKnown RBP16.44■□□□□ 0.22
COL5A3-202ENST00000461214 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
COL5A3-202ENST00000461214 SREBF1P36956 1147 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 RGS2P41220 211 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 ALDH5A1P51649 535 aaPredicted RBP16.43■□□□□ 0.22
COL5A3-202ENST00000461214 NUCB2P80303 420 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 NR5A1Q13285 461 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 FCHSD1Q86WN1 690 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 MSL3Q8N5Y2 521 aaKnown RBP16.43■□□□□ 0.22
COL5A3-202ENST00000461214 OXER1Q8TDS5 423 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 NSUN6Q8TEA1 469 aaKnown RBP16.43■□□□□ 0.22
COL5A3-202ENST00000461214 TBC1D5Q92609 795 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 USP6NLQ92738 828 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 RMDN3Q96TC7 470 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 ZSCAN16Q9H4T2 348 aaPredicted RBP16.43■□□□□ 0.22
COL5A3-202ENST00000461214 PXMP2Q9NR77 195 aa16.43■□□□□ 0.22
COL5A3-202ENST00000461214 XRCC5P13010 732 aaKnown RBP16.42■□□□□ 0.22
COL5A3-202ENST00000461214 ZNF792Q3KQV3 632 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 JAKMIP3Q5VZ66 844 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 MCTP1Q6DN14 999 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 RASGRP4Q8TDF6 673 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 IWS1Q96ST2 819 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 NAP1L4Q99733 375 aaKnown RBP16.42■□□□□ 0.22
COL5A3-202ENST00000461214 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL5A3-202ENST00000461214 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 ASTN1O14525 1302 aa16.42■□□□□ 0.22
COL5A3-202ENST00000461214 ASB14A6NK59 587 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 KIF28PB7ZC32 967 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 STAM2O75886 525 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 BRD1O95696 1058 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 F13A1P00488 732 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 PGK2P07205 417 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 RESTQ13127 1097 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 IRF5Q13568 498 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 PGM5Q15124 567 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 ARHGEF16Q5VV41 709 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 PCNX4Q63HM2 1172 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 MOXD1Q6UVY6 613 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 PIK3AP1Q6ZUJ8 805 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
COL5A3-202ENST00000461214 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 PXYLP1Q8TE99 480 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 CRYGNQ8WXF5 182 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 FGD4Q96M96 766 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 NOL7Q9UMY1 257 aaKnown RBP16.41■□□□□ 0.22
COL5A3-202ENST00000461214 SYNGAP1Q96PV0 1343 aa16.41■□□□□ 0.22
COL5A3-202ENST00000461214 SOWAHBA6NEL2 793 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 COBLO75128 1261 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 CYP3A4P08684 503 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 COL9A1P20849 921 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 EDNRBP24530 442 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 CCND2P30279 289 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 CNTN2Q02246 1040 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 ORC2Q13416 577 aaPredicted RBP16.4■□□□□ 0.22
COL5A3-202ENST00000461214 PKP1Q13835 747 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 OLFML2BQ68BL8 750 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 MAMDC4Q6UXC1 1216 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 NEK8Q86SG6 692 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 TAAR1Q96RJ0 339 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 C11orf49Q9H6J7 331 aa16.4■□□□□ 0.22
COL5A3-202ENST00000461214 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
COL5A3-202ENST00000461214 CAPN2P17655 700 aa16.39■□□□□ 0.21
COL5A3-202ENST00000461214 EIF2AK2P19525 551 aaKnown RBP16.39■□□□□ 0.21
COL5A3-202ENST00000461214 USP11P51784 963 aa16.39■□□□□ 0.21
COL5A3-202ENST00000461214 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
COL5A3-202ENST00000461214 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
COL5A3-202ENST00000461214 RILPL1Q5EBL4 403 aa16.39■□□□□ 0.21
COL5A3-202ENST00000461214 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms