RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 FOSP01100 380 aaPredicted RBP24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 SMPD1P17405 629 aa24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 NKX3-2P78367 333 aa24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 TNFAIP2Q03169 654 aa24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 PCNX4Q63HM2 1172 aa24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 CCDC62Q6P9F0 684 aa24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 UPF3AQ9H1J1 476 aaKnown RBP24.66■■□□□ 1.54
RPUSD3-205ENST00000427174 SYNRGQ9UMZ2 1314 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 SPDYE3A6NKU9 549 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 GNA11P29992 359 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 CCND2P30279 289 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 MCM2P49736 904 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 AP3B2Q13367 1082 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 DUSP28Q4G0W2 176 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 SCFD2Q8WU76 684 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 TMX3Q96JJ7 454 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 XPNPEP3Q9NQH7 507 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 TMEM260Q9NX78 707 aa24.65■■□□□ 1.54
RPUSD3-205ENST00000427174 CTAGE5O15320 804 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 ARIH2O95376 493 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 MYCLP12524 364 aaPredicted RBP24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 XRRA1Q6P2D8 792 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 DAGLBQ8NCG7 672 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 CRYGNQ8WXF5 182 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 INPP4AQ96PE3 977 aaPredicted RBP24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 ANO3Q9BYT9 981 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 WDR11Q9BZH6 1224 aa24.64■■□□□ 1.54
RPUSD3-205ENST00000427174 M0R2N6 131 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 STAM2O75886 525 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 PTGS1P23219 599 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 GJA9P57773 515 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 LRRC41Q15345 812 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 REXO1Q8N1G1 1221 aaKnown RBP24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 KLHDC9Q8NEP7 349 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 BICD2Q8TD16 824 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 DIS3LQ8TF46 1054 aaKnown RBP24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 PHF20Q9BVI0 1012 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 GJB4Q9NTQ9 266 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 Q9Y3F1 56 aa24.63■■□□□ 1.53
RPUSD3-205ENST00000427174 FARP2O94887 1054 aaPredicted RBP24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 PGK1P00558 417 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 COL6A1P12109 1028 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 SREBF1P36956 1147 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 GJC2Q5T442 439 aaPredicted RBP24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 MCTP2Q6DN12 878 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 CCSAPQ6IQ19 270 aaPredicted RBP24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 GALNT17Q6IS24 598 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 SEPT14Q6ZU15 432 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 ARRDC4Q8NCT1 418 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 WASF1Q92558 559 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 ZFP91Q96JP5 570 aaPredicted RBP24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 PGBD1Q96JS3 809 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 ALG1Q9BT22 464 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 PCDHA4Q9UN74 947 aa24.62■■□□□ 1.53
RPUSD3-205ENST00000427174 DNM1LO00429 736 aa24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 CST5P28325 142 aaPredicted RBP24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 NLRP5P59047 1200 aa24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 IRX5P78411 483 aaPredicted RBP24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 TTLL4Q14679 1199 aa24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 JAKMIP3Q5VZ66 844 aa24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 RASGRP4Q8TDF6 673 aa24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 KCNJ14Q9UNX9 436 aa24.61■■□□□ 1.53
RPUSD3-205ENST00000427174 MYADML2A6NDP7 307 aa24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 NKRFO15226 690 aaKnown RBP eCLIP24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 TXNP10599 105 aaKnown RBP24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 ICAM3P32942 547 aa24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 SEMA3FQ13275 785 aa24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 TLK2Q86UE8 772 aa24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 PAWRQ96IZ0 340 aaKnown RBP24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 EHMT1Q9H9B1 1298 aa24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 DDX41Q9UJV9 622 aaKnown RBP24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 UBIAD1Q9Y5Z9 338 aa24.6■■□□□ 1.53
RPUSD3-205ENST00000427174 BLIDQ8IZY5 108 aa24.59■■□□□ 1.53
RPUSD3-205ENST00000427174 COPS5Q92905 334 aa24.59■■□□□ 1.53
RPUSD3-205ENST00000427174 CEP290O15078 2479 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 EDIL3O43854 480 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 TGFB3P10600 412 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 XBP1P17861 261 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 ITGB5P18084 799 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 HMGN5P82970 282 aaKnown RBP24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 LY6KQ17RY6 165 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 KCNV1Q6PIU1 500 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 RNF180Q86T96 592 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 RTEL1Q9NZ71 1219 aa24.58■■□□□ 1.53
RPUSD3-205ENST00000427174 SCN10AQ9Y5Y9 1956 aa24.58■■□□□ 1.52
RPUSD3-205ENST00000427174 SPATA31C2B4DYI2 1134 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 DYNC1LI2O43237 492 aaPredicted RBP24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 CYP3A4P08684 503 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 ARHGAP4P98171 946 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 SP2Q02086 613 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 GNPTABQ3T906 1256 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 NECAB2Q7Z6G3 386 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 GPRASP2Q96D09 838 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 TSEN34Q9BSV6 310 aaKnown RBP24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 PHF24Q9UPV7 400 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 MRVI1Q9Y6F6 885 aa24.57■■□□□ 1.52
RPUSD3-205ENST00000427174 C6orf222P0C671 652 aaPredicted RBP24.56■■□□□ 1.52
RPUSD3-205ENST00000427174 ARHGAP1Q07960 439 aa24.56■■□□□ 1.52
RPUSD3-205ENST00000427174 CUL4AQ13619 759 aa24.56■■□□□ 1.52
RPUSD3-205ENST00000427174 EMID1Q96A84 441 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms