RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 CCND2P30279 289 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
LMO3-206ENST00000424192 GJA8P48165 433 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 TRIM32Q13049 653 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 ACVR2BQ13705 512 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 STXBP2Q15833 593 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 PKN1Q16512 942 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 ZMYND12Q9H0C1 365 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 SMCO2A6NFE2 343 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 MEIS2O14770 477 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 LARGE1O95461 756 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
LMO3-206ENST00000424192 EIF2AK2P19525 551 aaKnown RBP13.41□□□□□ -0.26
LMO3-206ENST00000424192 FCHSD1Q86WN1 690 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 REXO1Q8N1G1 1221 aaKnown RBP13.41□□□□□ -0.26
LMO3-206ENST00000424192 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
LMO3-206ENST00000424192 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 DEFB118Q96PH6 123 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 PDCD2LQ9BRP1 358 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 SPC25Q9HBM1 224 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 COL20A1Q9P218 1284 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
LMO3-206ENST00000424192 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
LMO3-206ENST00000424192 SMCHD1A6NHR9 2005 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
LMO3-206ENST00000424192 SGPL1O95470 568 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 NR3C2P08235 984 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 ZNF865P0CJ78 1059 aaPredicted RBP13.4□□□□□ -0.26
LMO3-206ENST00000424192 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
LMO3-206ENST00000424192 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 TRIM29Q14134 588 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 PGM5Q15124 567 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 KCNV1Q6PIU1 500 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 USP17L6PQ6QN14 398 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
LMO3-206ENST00000424192 NECAB1Q8N987 351 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 DAGLBQ8NCG7 672 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 NSUN7Q8NE18 718 aaKnown RBP13.4□□□□□ -0.26
LMO3-206ENST00000424192 TBC1D5Q92609 795 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 TAAR1Q96RJ0 339 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 BRMS1Q9HCU9 246 aa13.4□□□□□ -0.26
LMO3-206ENST00000424192 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
LMO3-206ENST00000424192 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
LMO3-206ENST00000424192 MYCP01106 439 aaPredicted RBP13.39□□□□□ -0.27
LMO3-206ENST00000424192 NLRP5P59047 1200 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 TTLL4Q14679 1199 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 PCNX4Q63HM2 1172 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 TRPV1Q8NER1 839 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 ANO3Q9BYT9 981 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 KATNBL1Q9H079 304 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 OGDHLQ9ULD0 1010 aa13.39□□□□□ -0.27
LMO3-206ENST00000424192 RBM47A0AV96 593 aaKnown RBP13.38□□□□□ -0.27
LMO3-206ENST00000424192 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 TFRCP02786 760 aaKnown RBP13.38□□□□□ -0.27
LMO3-206ENST00000424192 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
LMO3-206ENST00000424192 SOX10P56693 466 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 UBE2SQ16763 222 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 RNF180Q86T96 592 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 VSIG10LQ86VR7 867 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 PURBQ96QR8 312 aaKnown RBP13.38□□□□□ -0.27
LMO3-206ENST00000424192 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 PCDHA6Q9UN73 950 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 PCDHA4Q9UN74 947 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 Q9Y3F1 56 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.38□□□□□ -0.27
LMO3-206ENST00000424192 PCDHA8Q9Y5H6 950 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 MCM3APO60318 1980 aa13.38□□□□□ -0.27
LMO3-206ENST00000424192 CENPFP49454 3210 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 DNM1LO00429 736 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 TGFB3P10600 412 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 SREBF1P36956 1147 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 DUSP28Q4G0W2 176 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 BRDTQ58F21 947 aaPredicted RBP13.37□□□□□ -0.27
LMO3-206ENST00000424192 LHX8Q68G74 356 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 NLRX1Q86UT6 975 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 FAM184AQ8NB25 1140 aa13.37□□□□□ -0.27
LMO3-206ENST00000424192 INPP4AQ96PE3 977 aaPredicted RBP13.37□□□□□ -0.27
LMO3-206ENST00000424192 FIBPO43427 364 aa13.36□□□□□ -0.27
LMO3-206ENST00000424192 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
LMO3-206ENST00000424192 MYCLP12524 364 aaPredicted RBP13.36□□□□□ -0.27
LMO3-206ENST00000424192 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
LMO3-206ENST00000424192 ADCYAP1R1P41586 468 aa13.36□□□□□ -0.27
LMO3-206ENST00000424192 ST3GAL1Q11201 340 aa13.36□□□□□ -0.27
LMO3-206ENST00000424192 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
LMO3-206ENST00000424192 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms