RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MBD3O95983 291 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 FAM160A1Q05DH4 1040 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 HSP90AA4PQ58FG1 418 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 DTHD1Q6ZMT9 781 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 MTRQ99707 1265 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 ADAMTS5Q9UNA0 930 aa13.23□□□□□ -0.29
SKA3-203ENST00000400018 EML1O00423 815 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 CXCL11O14625 94 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 CMA1P23946 247 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
SKA3-203ENST00000400018 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
SKA3-203ENST00000400018 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 RGL1Q9NZL6 768 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 PASKQ96RG2 1323 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
SKA3-203ENST00000400018 CUTAO60888 179 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 CAP1Q01518 475 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 ARHGEF16Q5VV41 709 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
SKA3-203ENST00000400018 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 GALNT17Q6IS24 598 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 MTMR9Q96QG7 549 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 MCM3APO60318 1980 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 DOCK5Q9H7D0 1870 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 PLA2G6O60733 806 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 SREBF1P36956 1147 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 PSMC6P62333 389 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 PGM5Q15124 567 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.29
SKA3-203ENST00000400018 RGMBQ6NW40 437 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 PLA2G4DQ86XP0 818 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.29
SKA3-203ENST00000400018 CNNM3Q8NE01 707 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 MAPK8IP1Q9UQF2 711 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 HPSEQ9Y251 543 aa13.21□□□□□ -0.29
SKA3-203ENST00000400018 RGS20O76081 388 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
SKA3-203ENST00000400018 HSD17B4P51659 736 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 EEF2KMTQ96G04 330 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 CLSTN2Q9H4D0 955 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 GINM1Q9NU53 330 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SKA3-203ENST00000400018 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 ERVK-24P63145 666 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
SKA3-203ENST00000400018 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
SKA3-203ENST00000400018 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
SKA3-203ENST00000400018 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 CEP131Q9UPN4 1083 aa13.2□□□□□ -0.3
SKA3-203ENST00000400018 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 PLCG1P19174 1290 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 CTTNQ14247 550 aaKnown RBP13.19□□□□□ -0.3
SKA3-203ENST00000400018 NAALADL2Q58DX5 795 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 POTEGQ6S5H5 508 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 PDCD2LQ9BRP1 358 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 PXMP2Q9NR77 195 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 FAM155AB1AL88 458 aaPredicted RBP13.19□□□□□ -0.3
SKA3-203ENST00000400018 E9PMD0 336 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 CETPP11597 493 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 TRAPPC10P48553 1259 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 GTF2A2P52657 109 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 SP2Q02086 613 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 CUL4BQ13620 913 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
SKA3-203ENST00000400018 ETNPPLQ8TBG4 499 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
SKA3-203ENST00000400018 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 ACTN4O43707 911 aaKnown RBP13.19□□□□□ -0.3
SKA3-203ENST00000400018 MED24O75448 989 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 NR3C2P08235 984 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 UBA7P41226 1012 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
SKA3-203ENST00000400018 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 SNX29Q8TEQ0 813 aa13.19□□□□□ -0.3
SKA3-203ENST00000400018 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms