RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 RUBCNQ92622 972 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 COA7Q96BR5 231 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 MMS19Q96T76 1030 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 MMTAG2Q9BU76 263 aaKnown RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 SEMA6BQ9H3T3 888 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 TMEM260Q9NX78 707 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 HDAC6Q9UBN7 1215 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 DDX25Q9UHL0 483 aaKnown RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 PCDHA12Q9UN75 941 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 SSBP05455 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 PRLRP16471 622 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 KIF11P52732 1056 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 RHBDL3P58872 404 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 SLC9C1Q4G0N8 1177 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 DDX12PQ92771 950 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 SERPINB13Q9UIV8 391 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 TRAF5O00463 557 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 SLC26A4O43511 780 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 KRT18P05783 430 aaKnown RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 NOVP48745 357 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 TDRD12Q587J7 1177 aaKnown RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 MUM1L1Q5H9M0 696 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 LRRC47Q8N1G4 583 aaKnown RBP9.1□□□□□ -0.95
NEDD1-201ENST00000266742 PODXL2Q9NZ53 605 aa9.1□□□□□ -0.95
NEDD1-201ENST00000266742 H3BQF6 201 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 SERPINB2P05120 415 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 ACTN2P35609 894 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 GTF2IP78347 998 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 ATP2B2Q01814 1243 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 MCTP2Q6DN12 878 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 DPP8Q6V1X1 898 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-201ENST00000266742 NOX5Q96PH1 765 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 LACRTQ9GZZ8 138 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 PSTPIP2Q9H939 334 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 BLOC1S4Q9NUP1 217 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 HYOU1Q9Y4L1 999 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 MPHOSPH10O00566 681 aaKnown RBP9.09□□□□□ -0.95
NEDD1-201ENST00000266742 SRGAP2O75044 1071 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 TDP2O95551 362 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 KLK7P49862 253 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 FAM26FQ5R3K3 315 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 CEP63Q96MT8 703 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 ZC3H12CQ9C0D7 883 aaKnown RBP9.09□□□□□ -0.95
NEDD1-201ENST00000266742 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 PANK4Q9NVE7 773 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 SNX12Q9UMY4 172 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 COL4A3BPQ9Y5P4 624 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 MYO3BQ8WXR4 1341 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 SNED1Q8TER0 1413 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 SSU72P8A0A1W2PR75 194 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 POTEMA6NI47 508 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 EIF4A3P38919 411 aaKnown RBP9.09□□□□□ -0.95
NEDD1-201ENST00000266742 ITIH3Q06033 890 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 ZNF543Q08ER8 600 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 RNF10Q8N5U6 811 aaKnown RBP9.09□□□□□ -0.95
NEDD1-201ENST00000266742 TBC1D16Q8TBP0 767 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 CCDC17Q96LX7 622 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 PNMA5Q96PV4 448 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 PURBQ96QR8 312 aaKnown RBP9.09□□□□□ -0.95
NEDD1-201ENST00000266742 SH2D4AQ9H788 454 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 RNF14Q9UBS8 474 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 FAN1Q9Y2M0 1017 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 DAGLAQ9Y4D2 1042 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 STK24Q9Y6E0 443 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 PLIN4Q96Q06 1357 aa9.09□□□□□ -0.95
NEDD1-201ENST00000266742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
NEDD1-201ENST00000266742 CRY2Q49AN0 593 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 ERMNQ8TAM6 284 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 HPS3Q969F9 1004 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 CRAMP1Q96RY5 1269 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 TRIM34Q9BYJ4 488 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 USP21Q9UK80 565 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 FAM184BQ9ULE4 1060 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 ZBTB5O15062 677 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 TFRCP02786 760 aaKnown RBP9.08□□□□□ -0.96
NEDD1-201ENST00000266742 EIF6P56537 245 aaKnown RBP9.08□□□□□ -0.96
NEDD1-201ENST00000266742 SFMBT2Q5VUG0 894 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 HAUS3Q68CZ6 603 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 PTF1AQ7RTS3 328 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 COG1Q8WTW3 980 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 RUFY1Q96T51 708 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 SIK3Q9Y2K2 1263 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEDD1-201ENST00000266742 COL24A1Q17RW2 1714 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 LRRC53A6NM62 1247 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 SLC37A4O43826 429 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 SNHG28P0DPA3 235 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 ADGRF4Q8IZF3 695 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 SUGCTQ9HAC7 445 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 USP40Q9NVE5 1235 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 CEP72Q9P209 647 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 RAD21O60216 631 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 PHACTR2O75167 634 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 AKR1B1P15121 316 aa9.08□□□□□ -0.96
NEDD1-201ENST00000266742 GYS2P54840 703 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms