RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 EHD2Q9NZN4 543 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 PPP1R11O60927 126 aaPredicted RBP18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 IL1R1P14778 569 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 FIGNQ5HY92 759 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 HDAC7Q8WUI4 952 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 RAD54LQ92698 747 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 SALL4Q9UJQ4 1053 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 SYF2O95926 243 aaKnown RBP18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 MATR3P43243 847 aaKnown RBP eCLIP18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 FXR2P51116 673 aaKnown RBP eCLIP18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 GTF2IP78347 998 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 TMEM266Q2M3C6 531 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 FGFBP2Q9BYJ0 223 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 PSD3Q9NYI0 1048 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 DAGLAQ9Y4D2 1042 aa18.17■□□□□ 0.5
TM9SF1-201ENST00000261789 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 RIMBP2O15034 1052 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 AKR1B10O60218 316 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 SSBP05455 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 APBA1Q02410 837 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 GFPT1Q06210 699 aaPredicted RBP18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 CREG2Q8IUH2 290 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 FAM204AQ9H8W3 233 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 DDX4Q9NQI0 724 aaKnown RBP18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 ESYT2A0FGR8 921 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 NCK2O43639 380 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 TUBBP07437 444 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 CKAP4Q07065 602 aaKnown RBP18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 MAN2A1Q16706 1144 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 KRT79Q5XKE5 535 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 NFRKBQ6P4R8 1299 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 FOXR1Q6PIV2 292 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 FAM71BQ8TC56 605 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 MXD3Q9BW11 206 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 JMJD4Q9H9V9 463 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 NLRC4Q9NPP4 1024 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 HPCAL4Q9UM19 191 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 SNX12Q9UMY4 172 aa18.16■□□□□ 0.5
TM9SF1-201ENST00000261789 RNF40O75150 1001 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 PLCG2P16885 1265 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 ACTN2P35609 894 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 PPP1R2P41236 205 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 CDK17Q00537 523 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 COBLL1Q53SF7 1204 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 GUF1Q8N442 669 aaKnown RBP18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 MSL3Q8N5Y2 521 aaKnown RBP18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 LRRC4BQ9NT99 713 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 PVALEFA0A1B0GWK0 134 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 ANO9A1A5B4 782 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 SMARCA1P28370 1054 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 NOVP48745 357 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 SLC7A5Q01650 507 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 BAP1Q92560 729 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 HAS1Q92839 578 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 LCMT1Q9UIC8 334 aa18.15■□□□□ 0.5
TM9SF1-201ENST00000261789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 RAD21O60216 631 aa18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 USO1O60763 962 aaKnown RBP18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 ATP2B4P23634 1241 aa18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 HNRNPH3P31942 346 aaKnown RBP18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 KCNMA1Q12791 1236 aa18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 LRRC1Q9BTT6 524 aa18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 DDX25Q9UHL0 483 aaKnown RBP18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 JRKLQ9Y4A0 524 aa18.14■□□□□ 0.5
TM9SF1-201ENST00000261789 NPHP3-ACAD11A0A0J9YXS1 232 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 BUB1O43683 1085 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 RASSF7Q02833 373 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 CCNI2Q6ZMN8 369 aaPredicted RBP18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 NELFCDQ8IXH7 590 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 TRIM58Q8NG06 486 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 GOLGA5Q8TBA6 731 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 CRACR2AQ9BSW2 395 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 SELENOOQ9BVL4 669 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 DMGDHQ9UI17 866 aaKnown RBP18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 GAKO14976 1311 aa18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 ZC3H4Q9UPT8 1303 aaKnown RBP18.14■□□□□ 0.49
TM9SF1-201ENST00000261789 MARCH6O60337 910 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 TACC1O75410 805 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 CACNA2D4Q7Z3S7 1137 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 FAM163AQ96GL9 167 aaPredicted RBP18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 TSGA10Q9BZW7 698 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 TARSL2A2RTX5 802 aaKnown RBP18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 USP17L10C9JJH3 530 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 TULP2O00295 520 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 GGCXP38435 758 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 MAGEA1P43355 309 aa18.13■□□□□ 0.49
TM9SF1-201ENST00000261789 EHHADHQ08426 723 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms