RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Simc1E9Q6E9 1354 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Plekhd1B2RPU2 505 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 P4hbP09103 509 aaKnown RBP13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 NapbP28663 298 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Oprl1P35377 367 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Msh2P43247 935 aaKnown RBP13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Cep126Q0VBV7 1103 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gm5169Q5M8P2 212 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sh3gl1Q62419 368 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Lilrb4Q64281 335 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Kdm1aQ6ZQ88 853 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pank4Q80YV4 820 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 FsbpQ8BKE5 299 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 ArpinQ9D0A3 226 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Rsrc1Q9DBU6 334 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ltb4r2Q9JJL9 360 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pcdh11xF6ZNL5 1338 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gm1993A6X8I0 212 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 SlxD3Z347 212 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Tada2bD3Z4Z0 420 aaKnown RBP13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Dnajc5P60904 198 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Swap70Q6A028 585 aaKnown RBP13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Man2a2Q8BRK9 1152 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Trim52Q8CDV4 233 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Caap1Q8VDY9 356 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 NcaldQ91X97 193 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Golga1Q9CW79 758 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Trim42Q9D2H5 723 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ccdc105Q9D4K7 499 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Eif4enif1Q9EST3 983 aaKnown RBP13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Fam171a1A2ATK9 892 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Otud7bB2RUR8 840 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sema3eP70275 775 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Fhdc1Q3ULZ2 1149 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 RragaQ80X95 313 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Fbxo38Q8BMI0 1194 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Chmp7Q8R1T1 451 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sugt1Q9CX34 336 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Eef1gQ9D8N0 437 aaKnown RBP13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Phkg2Q9DB30 406 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Kcnq5Q9JK45 933 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Atp6v1g2Q9WTT4 118 aa13.56□□□□□ -0.24
Trim23-201ENSMUST00000022225 Kdm3aQ6PCM1 1323 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Slc4a4O88343 1079 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gdap1O88741 358 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Krt8P11679 490 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 MarcksP26645 309 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 AgpsQ8C0I1 645 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ccdc87Q8CDL9 855 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Abcf3Q8K268 709 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pspc1Q8R326 523 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Prpf3Q922U1 683 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ranbp17Q99NF8 1088 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sf3a3Q9D554 501 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Tbc1d16A2ABG4 766 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Hsf3D0VYS2 492 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Dctn1O08788 1281 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Lrrc55Q3UY51 311 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Shc3Q61120 474 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Nlrp9aQ66X03 949 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Rbm26Q6NZN0 1012 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Klhdc10Q6PAR0 439 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ccdc122Q8BVN0 290 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Trim29Q8R2Q0 587 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Btbd18A0A0A6YY25 723 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Osbpl9A2A8Z1 736 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Samd15F6XZJ7 620 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Stag2O35638 1231 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 RpsaP14206 295 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ftl2P49945 183 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ephb4P54761 987 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 NcstnP57716 708 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Nhej1Q3KNJ2 295 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gdpd4Q3TT99 632 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 SfswapQ3USH5 945 aaKnown RBP13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Zkscan8Q8BSL0 588 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Arhgap18Q8K0Q5 663 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Trpm8Q8R4D5 1104 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ubac1Q8VDI7 409 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Col15a1O35206 1367 aa13.55□□□□□ -0.24
Trim23-201ENSMUST00000022225 Api5O35841 504 aaKnown RBP13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Cd3dP04235 173 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Myd88P22366 296 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Xrcc6P23475 608 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Stat4P42228 749 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Tspyl3Q3UYP3 334 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ushbp1Q8R370 680 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 DgkiD3YWQ0 1071 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 R3hdm1E9Q9Q2 1135 aaKnown RBP13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ctnnal1O88327 731 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Rb1P13405 921 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ets2P15037 468 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Luc7l3Q5SUF2 432 aaKnown RBP13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Znf280dQ68FE8 974 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gtpbp10Q8K013 366 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 AslQ91YI0 464 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Kcnh5Q920E3 988 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Rbm43Q99J64 343 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Col4a1P02463 1669 aa13.54□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ubr2Q6WKZ8 1755 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms