RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Klrk1O54709 232 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Mark2Q05512 776 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Fhdc1Q3ULZ2 1149 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ddx49Q4FZF3 480 aaKnown RBP13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 FcgrtQ61559 365 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 KaznQ69ZS8 779 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Arid5bQ8BM75 1188 aaKnown RBP13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Antxr1Q9CZ52 562 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Csf1rP09581 977 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 TdgP56581 421 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gbp4Q61107 620 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 DaglaQ6WQJ1 1044 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Bzw2Q91VK1 419 aaKnown RBP13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 GsdmeQ9Z2D3 512 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Chd4Q6PDQ2 1915 aaKnown RBP13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Brpf3B2KF05 1204 aaKnown RBP13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Rgs9O54828 675 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gsta4P24472 222 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Cacna2d2Q6PHS9 1154 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Slc17a8Q8BFU8 601 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Maip1Q8BHE8 291 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Creb3l3Q91XE9 479 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Arfgap2Q99K28 520 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gtf2a1Q99PM3 378 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Slc5a5Q99PN0 618 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Cox16Q9CR63 106 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Dusp10Q9ESS0 483 aa13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ddx20Q9JJY4 825 aaKnown RBP13.2□□□□□ -0.3
Ctr9-201ENSMUST00000005749 DnmbpQ6TXD4 1580 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 4931408C20RikE9PWP9 1381 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gm5580A0A0N4SVP8 411 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Samsn1P57725 372 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Oog3Q3UWY1 500 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ppm1eQ80TL0 749 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ttc27Q8CD92 847 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Thap12Q9CUX1 758 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Arhgef7Q9ES28 862 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Speer2E9Q9U2 264 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Rbm12b2Q66JV4 834 aaKnown RBP13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Cct8l1Q80YT3 562 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ece2Q80Z60 881 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 NapgQ9CWZ7 312 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Scyl1Q9EQC5 806 aaKnown RBP13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Doc2gQ9ESN1 387 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 DccP70211 1447 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ugt1a6bK9J7B2 531 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Fam167bP17257 162 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Senp1P59110 640 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Fam89aQ14BJ1 175 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Plekhf1Q3TB82 279 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Mindy4Q3UQI9 744 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ugt1a6Q64435 531 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Ugt1a7cQ6ZQM8 531 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Olfr390Q8VEZ7 311 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Rwdd2aQ9D9S3 292 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 PplQ9R269 1755 aa13.19□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Zscan2Q07230 614 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 D630036H23RikQ3UQD6 204 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Map3k11Q80XI6 850 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Rcor2Q8C796 523 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Rsad2Q8CBB9 362 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Sh3bp5lQ99LH9 392 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 CalcbQ99MP3 130 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Mcur1Q9CXD6 340 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 SmapQ9R0P4 181 aaKnown RBP13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Kansl3A2RSY1 903 aaKnown RBP13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Zc3h13E9Q784 1729 aaKnown RBP13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Tnnc2P20801 160 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Zbtb17Q60821 794 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Scfd2Q8BTY8 684 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Fndc3aQ8BX90 1198 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Eif4enif1Q9EST3 983 aaKnown RBP13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Celf2Q9Z0H4 508 aaKnown RBP13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 CoblQ5NBX1 1337 aaKnown RBP13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Grin1P35438 938 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 StamP70297 548 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Tex35Q14BK3 207 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Sorbs1Q62417 1290 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Tmem87aQ8BXN9 555 aa13.18□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Apol6B7ZC55 329 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gm44503E9PYU5 387 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 P01734 135 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 U2af2P26369 475 aaKnown RBP13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Arhgef18Q6P9R4 1021 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Aox3G3X982 1335 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gm28042B7ZCM9 1014 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Pdcl2Q78Y63 240 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Trim6Q8BGE7 488 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Bola2Q8BGS2 86 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 GopcQ8BH60 463 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Cdc26Q99JP4 85 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Gm36210A0A1B0GS00 229 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Serpinb6bO08804 377 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Xrcc5P27641 732 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 DesP31001 469 aaKnown RBP13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 AdkP55264 361 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Il17raQ60943 864 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Nim1kQ8BHI9 436 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Mis18aQ9CZJ6 204 aa13.17□□□□□ -0.3
Ctr9-201ENSMUST00000005749 Chmp2aQ9DB34 222 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms