RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SLD5Q03406 294 aa2.34□□□□□ -2.04
BRO1YPL084W ARX1Q03862 593 aaKnown RBP2.34□□□□□ -2.04
BRO1YPL084W IVY1Q04934 453 aa2.34□□□□□ -2.04
BRO1YPL084W ERP4Q12450 207 aa2.34□□□□□ -2.04
BRO1YPL084W BRR1Q99177 341 aaPredicted RBP2.34□□□□□ -2.04
BRO1YPL084W YRF1-4O13559 1382 aa2.34□□□□□ -2.04
BRO1YPL084W BUD14P27637 709 aa2.33□□□□□ -2.04
BRO1YPL084W RAD14P28519 371 aa2.33□□□□□ -2.04
BRO1YPL084W DBF4P32325 704 aa2.33□□□□□ -2.04
BRO1YPL084W HCS1P34243 683 aa2.33□□□□□ -2.04
BRO1YPL084W TUL1P36096 758 aa2.33□□□□□ -2.04
BRO1YPL084W YJL068CP40363 299 aa2.33□□□□□ -2.04
BRO1YPL084W SYG1P40528 902 aa2.33□□□□□ -2.04
BRO1YPL084W OCA1P50946 238 aaPredicted RBP2.33□□□□□ -2.04
BRO1YPL084W LSC1P53598 329 aaKnown RBP2.33□□□□□ -2.04
BRO1YPL084W REC107P21651 314 aa2.33□□□□□ -2.04
BRO1YPL084W YCR051WP25631 222 aa2.33□□□□□ -2.04
BRO1YPL084W ADK2P26364 225 aa2.33□□□□□ -2.04
BRO1YPL084W PPZ1P26570 692 aa2.33□□□□□ -2.04
BRO1YPL084W GCS1P35197 352 aa2.33□□□□□ -2.04
BRO1YPL084W BZZ1P38822 633 aa2.33□□□□□ -2.04
BRO1YPL084W VPS52P39904 641 aa2.33□□□□□ -2.04
BRO1YPL084W YMR147WP40218 223 aaKnown RBP2.33□□□□□ -2.04
BRO1YPL084W VMA13P41807 478 aaKnown RBP2.33□□□□□ -2.04
BRO1YPL084W YDR131CQ03899 556 aa2.33□□□□□ -2.04
BRO1YPL084W FUN19P28003 413 aaPredicted RBP2.32□□□□□ -2.04
BRO1YPL084W YIM1P28625 365 aa2.32□□□□□ -2.04
BRO1YPL084W RML2P32611 393 aa2.32□□□□□ -2.04
BRO1YPL084W FRE1P32791 686 aa2.32□□□□□ -2.04
BRO1YPL084W STB6P36085 766 aa2.32□□□□□ -2.04
BRO1YPL084W RIM2P38127 377 aa2.32□□□□□ -2.04
BRO1YPL084W THI2P38141 450 aa2.32□□□□□ -2.04
BRO1YPL084W CUL3P53202 744 aa2.32□□□□□ -2.04
BRO1YPL084W GPI1P53306 609 aa2.32□□□□□ -2.04
BRO1YPL084W RLI1Q03195 608 aaKnown RBP2.32□□□□□ -2.04
BRO1YPL084W NUP53Q03790 475 aa2.32□□□□□ -2.04
BRO1YPL084W ROY1Q04847 553 aa2.32□□□□□ -2.04
BRO1YPL084W SIL1Q08199 421 aa2.32□□□□□ -2.04
BRO1YPL084W ISN1Q99312 450 aa2.32□□□□□ -2.04
BRO1YPL084W RHO2P06781 192 aa2.32□□□□□ -2.04
BRO1YPL084W GLK1P17709 500 aaKnown RBP2.32□□□□□ -2.04
BRO1YPL084W ATP11P32453 318 aa2.32□□□□□ -2.04
BRO1YPL084W YTA12P40341 825 aa2.32□□□□□ -2.04
BRO1YPL084W IKS1P47042 667 aa2.32□□□□□ -2.04
BRO1YPL084W BNI5P53890 448 aaKnown RBP2.32□□□□□ -2.04
BRO1YPL084W BNA5Q05979 453 aa2.32□□□□□ -2.04
BRO1YPL084W SYO1Q07395 620 aa2.32□□□□□ -2.04
BRO1YPL084W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
BRO1YPL084W CFT2Q12102 859 aaPredicted RBP2.32□□□□□ -2.04
BRO1YPL084W RKM5Q12367 367 aa2.32□□□□□ -2.04
BRO1YPL084W ISA2Q12425 185 aa2.32□□□□□ -2.04
BRO1YPL084W AFI1Q99222 893 aa2.32□□□□□ -2.04
BRO1YPL084W SPS4P09937 338 aa2.31□□□□□ -2.04
BRO1YPL084W CLC1P17891 233 aa2.31□□□□□ -2.04
BRO1YPL084W ATP10P18496 279 aa2.31□□□□□ -2.04
BRO1YPL084W YCR007CP25354 239 aa2.31□□□□□ -2.04
BRO1YPL084W SEC1P30619 724 aaKnown RBP2.31□□□□□ -2.04
BRO1YPL084W VMA8P32610 256 aaKnown RBP2.31□□□□□ -2.04
BRO1YPL084W SIP2P34164 415 aaKnown RBP2.31□□□□□ -2.04
BRO1YPL084W SNM1P40993 198 aa2.31□□□□□ -2.04
BRO1YPL084W KTR5P53966 522 aaPredicted RBP2.31□□□□□ -2.04
BRO1YPL084W ERB1Q04660 807 aaKnown RBP2.31□□□□□ -2.04
BRO1YPL084W SMC6Q12749 1114 aa2.31□□□□□ -2.04
BRO1YPL084W CDC23P16522 626 aa2.31□□□□□ -2.04
BRO1YPL084W YME2P32843 850 aa2.31□□□□□ -2.04
BRO1YPL084W DIM1P41819 318 aaKnown RBP2.31□□□□□ -2.04
BRO1YPL084W RMD9P53140 646 aaKnown RBP2.31□□□□□ -2.04
BRO1YPL084W RMT2Q03305 412 aa2.31□□□□□ -2.04
BRO1YPL084W MRPL51Q06090 140 aaPredicted RBP2.31□□□□□ -2.04
BRO1YPL084W YDL009CQ12210 107 aa2.31□□□□□ -2.04
BRO1YPL084W CAR1P00812 333 aaKnown RBP2.3□□□□□ -2.04
BRO1YPL084W HOM3P10869 527 aa2.3□□□□□ -2.04
BRO1YPL084W AMD1P15274 810 aaKnown RBP2.3□□□□□ -2.04
BRO1YPL084W PXA2P34230 853 aa2.3□□□□□ -2.04
BRO1YPL084W CBP4P37267 147 aa2.3□□□□□ -2.04
BRO1YPL084W IRC15Q02733 499 aa2.3□□□□□ -2.04
BRO1YPL084W YLR345WQ06137 509 aa2.3□□□□□ -2.04
BRO1YPL084W RRD2Q12461 358 aa2.3□□□□□ -2.04
BRO1YPL084W LEU4P06208 619 aaKnown RBP2.3□□□□□ -2.04
BRO1YPL084W MRS3P10566 314 aa2.3□□□□□ -2.04
BRO1YPL084W EXO70P19658 623 aa2.3□□□□□ -2.04
BRO1YPL084W BUB3P26449 341 aa2.3□□□□□ -2.04
BRO1YPL084W PTR2P32901 601 aa2.3□□□□□ -2.04
BRO1YPL084W NTC20P38302 140 aaPredicted RBP2.3□□□□□ -2.04
BRO1YPL084W VHC1P38329 1120 aa2.3□□□□□ -2.04
BRO1YPL084W SRP72P38688 640 aaKnown RBP2.3□□□□□ -2.04
BRO1YPL084W ZIM17P42844 174 aa2.3□□□□□ -2.04
BRO1YPL084W URB2P47108 1174 aa2.3□□□□□ -2.04
BRO1YPL084W FMS1P50264 508 aa2.3□□□□□ -2.04
BRO1YPL084W YGL138CP53122 345 aa2.3□□□□□ -2.04
BRO1YPL084W RSC1P53236 928 aa2.3□□□□□ -2.04
BRO1YPL084W KAP120Q02932 1032 aa2.3□□□□□ -2.04
BRO1YPL084W SOV1Q04748 898 aa2.3□□□□□ -2.04
BRO1YPL084W RRP45Q05636 305 aaKnown RBP2.3□□□□□ -2.04
BRO1YPL084W GRS2Q06817 618 aa2.3□□□□□ -2.04
BRO1YPL084W KEL3Q08979 651 aaPredicted RBP2.3□□□□□ -2.04
BRO1YPL084W LSP1Q12230 341 aaKnown RBP2.3□□□□□ -2.04
BRO1YPL084W CLB1P24868 471 aa2.29□□□□□ -2.04
BRO1YPL084W ERV1P27882 189 aa2.29□□□□□ -2.04
BRO1YPL084W URA7P28274 579 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms