RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W BNA3P47039 444 aaKnown RBP3.96□□□□□ -1.78
RET3YPL010W YJR039WP47107 1121 aa3.96□□□□□ -1.78
RET3YPL010W STR3P53101 465 aaKnown RBP3.96□□□□□ -1.78
RET3YPL010W NGL3Q03210 505 aa3.96□□□□□ -1.78
RET3YPL010W VHS1Q03785 461 aa3.96□□□□□ -1.78
RET3YPL010W RIM13Q03792 727 aa3.96□□□□□ -1.78
RET3YPL010W RRN11Q04712 507 aa3.96□□□□□ -1.78
RET3YPL010W IVY1Q04934 453 aa3.96□□□□□ -1.78
RET3YPL010W RSF1Q05043 376 aa3.96□□□□□ -1.78
RET3YPL010W OPY2Q06810 360 aa3.96□□□□□ -1.78
RET3YPL010W YDL086WQ07505 273 aa3.96□□□□□ -1.78
RET3YPL010W TMA16Q08687 178 aa3.96□□□□□ -1.78
RET3YPL010W BUD7Q08754 746 aa3.96□□□□□ -1.78
RET3YPL010W YPL272CQ08984 517 aa3.96□□□□□ -1.78
RET3YPL010W YLR125WQ12138 136 aa3.96□□□□□ -1.78
RET3YPL010W GLE1Q12315 538 aa3.96□□□□□ -1.78
RET3YPL010W OCA6Q12454 224 aa3.96□□□□□ -1.78
RET3YPL010W COX5AP00424 153 aa3.95□□□□□ -1.78
RET3YPL010W TUP1P16649 713 aa3.95□□□□□ -1.78
RET3YPL010W SFL1P20134 766 aa3.95□□□□□ -1.78
RET3YPL010W RFA2P26754 273 aaKnown RBP3.95□□□□□ -1.78
RET3YPL010W AEP1P32493 518 aa3.95□□□□□ -1.78
RET3YPL010W PEX6P33760 1030 aa3.95□□□□□ -1.78
RET3YPL010W VPS24P36095 224 aaKnown RBP3.95□□□□□ -1.78
RET3YPL010W OTU2P38747 307 aaKnown RBP3.95□□□□□ -1.78
RET3YPL010W CYC2P38909 366 aa3.95□□□□□ -1.78
RET3YPL010W PMC1P38929 1173 aaPredicted RBP3.95□□□□□ -1.78
RET3YPL010W MIT1P40002 666 aa3.95□□□□□ -1.78
RET3YPL010W VFA1P40080 203 aa3.95□□□□□ -1.78
RET3YPL010W RGI2P40188 164 aa3.95□□□□□ -1.78
RET3YPL010W ATM1P40416 690 aa3.95□□□□□ -1.78
RET3YPL010W YJL107CP42947 387 aa3.95□□□□□ -1.78
RET3YPL010W JJJ1P53863 590 aa3.95□□□□□ -1.78
RET3YPL010W RLI1Q03195 608 aaKnown RBP3.95□□□□□ -1.78
RET3YPL010W ATG16Q03818 150 aa3.95□□□□□ -1.78
RET3YPL010W ARX1Q03862 593 aaKnown RBP3.95□□□□□ -1.78
RET3YPL010W ATG33Q06485 197 aa3.95□□□□□ -1.78
RET3YPL010W HOP1P20050 605 aa3.94□□□□□ -1.78
RET3YPL010W YSP3P25036 478 aa3.94□□□□□ -1.78
RET3YPL010W FEN2P25621 512 aaKnown RBP3.94□□□□□ -1.78
RET3YPL010W PCL2P25693 308 aa3.94□□□□□ -1.78
RET3YPL010W SEC65P29478 273 aa3.94□□□□□ -1.78
RET3YPL010W DBF4P32325 704 aa3.94□□□□□ -1.78
RET3YPL010W GDA1P32621 518 aa3.94□□□□□ -1.78
RET3YPL010W RAD5P32849 1169 aaPredicted RBP3.94□□□□□ -1.78
RET3YPL010W NTR2P36118 322 aaPredicted RBP3.94□□□□□ -1.78
RET3YPL010W DIA4P38705 446 aaPredicted RBP3.94□□□□□ -1.78
RET3YPL010W DED81P38707 554 aaKnown RBP3.94□□□□□ -1.78
RET3YPL010W DBP8P38719 431 aa3.94□□□□□ -1.78
RET3YPL010W DSS1P39112 969 aa3.94□□□□□ -1.78
RET3YPL010W SPG5P42933 373 aa3.94□□□□□ -1.78
RET3YPL010W MPS3P47069 682 aa3.94□□□□□ -1.78
RET3YPL010W SAP4P53036 818 aa3.94□□□□□ -1.78
RET3YPL010W COG1P53079 417 aa3.94□□□□□ -1.78
RET3YPL010W COX18P53239 316 aa3.94□□□□□ -1.78
RET3YPL010W RHO3Q00245 231 aaKnown RBP3.94□□□□□ -1.78
RET3YPL010W MET14Q02196 202 aa3.94□□□□□ -1.78
RET3YPL010W UME1Q03010 460 aa3.94□□□□□ -1.78
RET3YPL010W YLR030WQ07967 263 aa3.94□□□□□ -1.78
RET3YPL010W NRT1Q08485 598 aa3.94□□□□□ -1.78
RET3YPL010W RRP12Q12754 1228 aaKnown RBP3.94□□□□□ -1.78
RET3YPL010W AI5_ALPHAQ9ZZX1 630 aa3.94□□□□□ -1.78
RET3YPL010W HFA1P32874 2273 aa3.94□□□□□ -1.78
RET3YPL010W YBR056W-AI2HB52 66 aa3.93□□□□□ -1.78
RET3YPL010W PHO5P00635 467 aa3.93□□□□□ -1.78
RET3YPL010W ACO1P19414 778 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
RET3YPL010W SEC62P21825 274 aa3.93□□□□□ -1.78
RET3YPL010W SLY1P22213 666 aa3.93□□□□□ -1.78
RET3YPL010W HXT3P32466 567 aaKnown RBP3.93□□□□□ -1.78
RET3YPL010W MSS1P32559 526 aaPredicted RBP3.93□□□□□ -1.78
RET3YPL010W UGP1P32861 499 aaKnown RBP3.93□□□□□ -1.78
RET3YPL010W PRP18P33411 251 aaPredicted RBP3.93□□□□□ -1.78
RET3YPL010W BLI1P35727 113 aa3.93□□□□□ -1.78
RET3YPL010W MRPL37P36532 105 aa3.93□□□□□ -1.78
RET3YPL010W YHR033WP38690 423 aa3.93□□□□□ -1.78
RET3YPL010W LYS1P38998 373 aaRIP-Chip data3.93□□□□□ -1.78not detected
RET3YPL010W TIM17P39515 158 aa3.93□□□□□ -1.78
RET3YPL010W MGS1P40151 587 aa3.93□□□□□ -1.78
RET3YPL010W YNL195CP40168 261 aa3.93□□□□□ -1.78
RET3YPL010W YJR030CP47101 745 aa3.93□□□□□ -1.78
RET3YPL010W YGR021WP53212 290 aa3.93□□□□□ -1.78
RET3YPL010W TIM13P53299 105 aa3.93□□□□□ -1.78
RET3YPL010W EFM6P53970 246 aa3.93□□□□□ -1.78
RET3YPL010W TRS23Q03784 219 aa3.93□□□□□ -1.78
RET3YPL010W SMF3Q12078 473 aaPredicted RBP3.93□□□□□ -1.78
RET3YPL010W DIN7Q12086 430 aa3.93□□□□□ -1.78
RET3YPL010W ATG9Q12142 997 aa3.93□□□□□ -1.78
RET3YPL010W HSP42Q12329 375 aa3.93□□□□□ -1.78
RET3YPL010W GTT2Q12390 233 aa3.93□□□□□ -1.78
RET3YPL010W POM34Q12445 299 aa3.93□□□□□ -1.78
RET3YPL010W BCY1P07278 416 aaKnown RBP3.92□□□□□ -1.78
RET3YPL010W ILS1P09436 1072 aaKnown RBP3.92□□□□□ -1.78
RET3YPL010W PMS1P14242 873 aa3.92□□□□□ -1.78
RET3YPL010W CLN1P20437 546 aa3.92□□□□□ -1.78
RET3YPL010W RPA135P22138 1203 aaKnown RBP3.92□□□□□ -1.78
RET3YPL010W IMG1P25626 169 aa3.92□□□□□ -1.78
RET3YPL010W SKN1P33336 771 aa3.92□□□□□ -1.78
RET3YPL010W STB6P36085 766 aa3.92□□□□□ -1.78
RET3YPL010W APL3P38065 1025 aa3.92□□□□□ -1.78
RET3YPL010W MAK5P38112 773 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms