RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	SPC2	Q04969	178 aa		11.74	□□□□□ -0.53
TIR4	YOR009W	HRP1	Q99383	534 aa	Known RBP	11.74	□□□□□ -0.53
TIR4	YOR009W	RAS2	P01120	322 aa	Known RBP	11.73	□□□□□ -0.53
TIR4	YOR009W	KAR1	P11927	433 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	MRP13	P12686	339 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	HOM2	P13663	365 aa	Known RBP	11.73	□□□□□ -0.53
TIR4	YOR009W	AAR2	P32357	355 aa	Predicted RBP	11.73	□□□□□ -0.53
TIR4	YOR009W	ATO2	P32907	282 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	YBR071W	P38243	211 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	PFS1	P38872	237 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	CAB2	P40506	365 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	GET1	P53192	235 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	YNL033W	P53964	284 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	YNL019C	P53975	284 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	NAN1	Q02931	896 aa	Known RBP	11.73	□□□□□ -0.53
TIR4	YOR009W	SUL2	Q12325	893 aa		11.73	□□□□□ -0.53
TIR4	YOR009W	YAK1	P14680	807 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	UGA1	P17649	471 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	PEX6	P33760	1030 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	TDP1	P38319	544 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	ATG7	P38862	630 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	FMO1	P38866	432 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	GGC1	P38988	300 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	TIF34	P40217	347 aa	Known RBP	11.72	□□□□□ -0.53
TIR4	YOR009W	AZF1	P41696	914 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	MET12	P46151	657 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	YNR014W	P53719	212 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	EFR3	Q03653	782 aa	Known RBP	11.72	□□□□□ -0.53
TIR4	YOR009W	HMO1	Q03973	246 aa	Known RBP	11.72	□□□□□ -0.53
TIR4	YOR009W	SRO7	Q12038	1033 aa		11.72	□□□□□ -0.53
TIR4	YOR009W	PRT1	P06103	763 aa	Known RBP	11.71	□□□□□ -0.53
TIR4	YOR009W	SRX1	P36077	127 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	FAD1	P38913	306 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	FMP32	P43557	207 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	AIM22	P47051	409 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	UPF3	P48412	387 aa	Known RBP	11.71	□□□□□ -0.53
TIR4	YOR009W	YGR016W	P53209	190 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	MMT1	Q03218	510 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	YMR010W	Q03687	405 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	RAD33	Q04231	177 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	EAF1	Q06337	982 aa		11.71	□□□□□ -0.53
TIR4	YOR009W	RPS21A	P0C0V8	87 aa	Known RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	RAP1	P11938	827 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	RDS2	P19541	446 aa	Known RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	SCL1	P21243	252 aa	Known RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	TRX3	P25372	127 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	NGG1	P32494	702 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	AST1	P35183	429 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	MRPL37	P36532	105 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	CBP4	P37267	147 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	DMA1	P38823	416 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	ECM10	P39987	644 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	SEC26	P41810	973 aa	Known RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	FMP33	P46998	180 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	MNN10	P50108	393 aa	Known RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	KXD1	P53158	218 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	GPI1	P53306	609 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	YNL140C	P53910	189 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	IRC15	Q02733	499 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	RPM2	Q02773	1202 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	RTT10	Q08924	1013 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	HAL9	Q12180	1030 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	GPR1	Q12361	961 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	THP2	O13539	261 aa	Known RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	MSS18	P08593	268 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	PRI2	P20457	528 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	MRP8	P35719	219 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	RGI1	P40043	161 aa	Predicted RBP	11.7	□□□□□ -0.54
TIR4	YOR009W	GMC2	Q06201	188 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	TFB4	Q12004	338 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	MLH3	Q12083	715 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	RPN6	Q12377	434 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	SNF8	Q12483	233 aa		11.7	□□□□□ -0.54
TIR4	YOR009W	TOP3	P13099	656 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	YAP1	P19880	650 aa	Known RBP	11.69	□□□□□ -0.54
TIR4	YOR009W	SIS1	P25294	352 aa	Known RBP	11.69	□□□□□ -0.54
TIR4	YOR009W	RVS161	P25343	265 aa	Known RBP	11.69	□□□□□ -0.54
TIR4	YOR009W	HCM1	P25364	564 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	SEC17	P32602	292 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	COS111	P38308	924 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	YIL108W	P40483	696 aa	Known RBP	11.69	□□□□□ -0.54
TIR4	YOR009W	GAB1	P41733	394 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	YDR444W	Q04093	687 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	RUP1	Q12242	671 aa		11.69	□□□□□ -0.54
TIR4	YOR009W	ERG6	P25087	383 aa	Known RBP	11.68	□□□□□ -0.54
TIR4	YOR009W	AXL2	P38928	823 aa		11.68	□□□□□ -0.54
TIR4	YOR009W	DSS1	P39112	969 aa		11.68	□□□□□ -0.54
TIR4	YOR009W	SSU1	P41930	458 aa		11.68	□□□□□ -0.54
TIR4	YOR009W	ERG26	P53199	349 aa	Known RBP	11.68	□□□□□ -0.54
TIR4	YOR009W	ART5	P53244	586 aa	Known RBP	11.68	□□□□□ -0.54
TIR4	YOR009W	NMD4	Q12129	218 aa		11.68	□□□□□ -0.54
TIR4	YOR009W	RPN5	Q12250	445 aa	Known RBP	11.68	□□□□□ -0.54
TIR4	YOR009W	MSB2	P32334	1306 aa		11.67	□□□□□ -0.54
TIR4	YOR009W	KIN2	P13186	1147 aa	Known RBP	11.67	□□□□□ -0.54
TIR4	YOR009W	TFB1	P32776	642 aa		11.67	□□□□□ -0.54
TIR4	YOR009W	KKQ8	P36004	724 aa		11.67	□□□□□ -0.54
TIR4	YOR009W	MUP1	P50276	574 aa		11.67	□□□□□ -0.54
TIR4	YOR009W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	11.67	□□□□□ -0.54	not detected
TIR4	YOR009W	YLL054C	Q12244	843 aa		11.67	□□□□□ -0.54
TIR4	YOR009W	TY4A-H	Q6Q5P6	413 aa		11.67	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms