RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	COQ9	Q05779	260 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	SSQ1	Q05931	657 aa	Predicted RBP	3.59	□□□□□ -1.83
LDS2	YOL047C	RGC1	Q06108	1083 aa	Known RBP	3.59	□□□□□ -1.83
LDS2	YOL047C	DCS1	Q06151	350 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	YPR078C	Q06813	372 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	CRD1	Q07560	283 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	ALE1	Q08548	619 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	APC5	Q08683	685 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	TRE1	Q08919	783 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	TCO89	Q08921	799 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	EMP46	Q12396	444 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	NOT5	Q12514	560 aa	Predicted RBP	3.59	□□□□□ -1.83
LDS2	YOL047C	CTF3	Q12748	733 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	YBL111C	Q3E7Y5	667 aa		3.59	□□□□□ -1.83
LDS2	YOL047C	SOD2	P00447	233 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	RPL6B	P05739	176 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	RPS4A	P0CX35	261 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	RPS4B	P0CX36	261 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	OM45	P16547	393 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	PRP6	P19735	899 aa	Predicted RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	PRE8	P23639	250 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	ERG6	P25087	383 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	PHO84	P25297	587 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	RRT12	P25381	491 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	PRE4	P30657	266 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	TFC1	P32367	649 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	PET127	P32606	800 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	SIP2	P34164	415 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	UBP11	P36026	717 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	CUE2	P36075	443 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	NTR2	P36118	322 aa	Predicted RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	THI2	P38141	450 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	TIF5	P38431	405 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	SFB3	P38810	929 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	YER137C	P40083	148 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	YMR147W	P40218	223 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	MAM33	P40513	266 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	PHB1	P40961	287 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	CCT7	P42943	550 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	YFH7	P43591	353 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	LIA1	P47120	325 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	YGL138C	P53122	345 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	INN1	P53901	409 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	ORC3	P54790	616 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	PRO2	P54885	456 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	UBP16	Q02863	499 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	NGL2	Q03264	515 aa	Known RBP	3.58	□□□□□ -1.84
LDS2	YOL047C	YML037C	Q03703	340 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	COX20	Q04935	205 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	YEH2	Q07950	538 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	BAG7	Q12128	409 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	VCX1	Q99385	411 aa		3.58	□□□□□ -1.84
LDS2	YOL047C	MF(ALPHA)1	P01149	165 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	RPS9B	P05755	195 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	COR1	P07256	457 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	TUB1	P09733	447 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	RPL3	P14126	387 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	CBF1	P17106	351 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	COQ1	P18900	473 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	DAP2	P18962	818 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	KGD2	P19262	463 aa	Predicted RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	PEX1	P24004	1043 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	DAL80	P26343	269 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	ICL1	P28240	557 aa	Predicted RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	ZIP1	P31111	875 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	YKL063C	P35725	167 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	YBR285W	P38354	144 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	KSP1	P38691	1029 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	TRM5	P38793	499 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	YHR078W	P38799	552 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	END3	P39013	349 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	AFG3	P39925	761 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	PAC11	P40960	533 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	FMP32	P43557	207 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	PRY1	P47032	299 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	EMC2	P47133	292 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	IMD3	P50095	523 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	YGL036W	P53185	909 aa	Predicted RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	CSL4	P53859	292 aa	Predicted RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	IPI3	P53877	555 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	ASI2	P53895	289 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	IMP4	P53941	290 aa	Known RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	TOF2	Q02208	771 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	FDC1	Q03034	503 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	MUS81	Q04149	632 aa	Predicted RBP	3.57	□□□□□ -1.84
LDS2	YOL047C	RCO1	Q04779	684 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	HOF1	Q05080	669 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	ADY4	Q05955	493 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	BCP1	Q06338	283 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	CDA1	Q06702	301 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	ARP6	Q12509	438 aa		3.57	□□□□□ -1.84
LDS2	YOL047C	CTT1	P06115	562 aa		3.56	□□□□□ -1.84
LDS2	YOL047C	CAF20	P12962	161 aa	Known RBP	3.56	□□□□□ -1.84
LDS2	YOL047C	KSS1	P14681	368 aa		3.56	□□□□□ -1.84
LDS2	YOL047C	PDC5	P16467	563 aa	Known RBP	3.56	□□□□□ -1.84
LDS2	YOL047C	CKA2	P19454	339 aa		3.56	□□□□□ -1.84
LDS2	YOL047C	HNM1	P19807	563 aa		3.56	□□□□□ -1.84
LDS2	YOL047C	YAP1	P19880	650 aa	Known RBP	3.56	□□□□□ -1.84
LDS2	YOL047C	ISY1	P21374	235 aa	Predicted RBP	3.56	□□□□□ -1.84
LDS2	YOL047C	RNR3	P21672	869 aa	Known RBP	3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms