RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C MTC4P38335 694 aaKnown RBP2.42□□□□□ -2.02
RPB11YOL005C MDM31P38880 579 aa2.42□□□□□ -2.02
RPB11YOL005C RPH1P39956 796 aa2.42□□□□□ -2.02
RPB11YOL005C SHO1P40073 367 aa2.42□□□□□ -2.02
RPB11YOL005C HXT14P42833 540 aa2.42□□□□□ -2.02
RPB11YOL005C YFR016CP43597 1233 aaKnown RBP2.42□□□□□ -2.02
RPB11YOL005C IRC6P43615 237 aa2.42□□□□□ -2.02
RPB11YOL005C RBS1Q05672 457 aaKnown RBP2.42□□□□□ -2.02
RPB11YOL005C SYO1Q07395 620 aa2.42□□□□□ -2.02
RPB11YOL005C CFT2Q12102 859 aaPredicted RBP2.42□□□□□ -2.02
RPB11YOL005C SEC39Q12745 709 aa2.42□□□□□ -2.02
RPB11YOL005C BRR1Q99177 341 aaPredicted RBP2.42□□□□□ -2.02
RPB11YOL005C RPL15AP05748 204 aaKnown RBP2.41□□□□□ -2.02
RPB11YOL005C GDH1P07262 454 aaKnown RBP2.41□□□□□ -2.02
RPB11YOL005C GLK1P17709 500 aaKnown RBP2.41□□□□□ -2.02
RPB11YOL005C FUR1P18562 216 aaKnown RBP2.41□□□□□ -2.02
RPB11YOL005C YCR007CP25354 239 aa2.41□□□□□ -2.02
RPB11YOL005C OTU2P38747 307 aaKnown RBP2.41□□□□□ -2.02
RPB11YOL005C MET18P40469 1032 aa2.41□□□□□ -2.02
RPB11YOL005C ROK1P45818 564 aaPredicted RBP2.41□□□□□ -2.02
RPB11YOL005C SYF1Q04048 859 aaPredicted RBP2.41□□□□□ -2.02
RPB11YOL005C VPS74Q06385 345 aa2.41□□□□□ -2.02
RPB11YOL005C PPT2Q12036 173 aa2.41□□□□□ -2.02
RPB11YOL005C AYT1Q12226 474 aa2.41□□□□□ -2.02
RPB11YOL005C RTP1Q12751 981 aa2.41□□□□□ -2.02
RPB11YOL005C YMR230W-AQ3E7B5 62 aa2.41□□□□□ -2.02
RPB11YOL005C TCB3Q03640 1545 aaKnown RBP2.41□□□□□ -2.02
RPB11YOL005C SUC2P00724 532 aa2.4□□□□□ -2.03
RPB11YOL005C PHO2P07269 559 aa2.4□□□□□ -2.03
RPB11YOL005C PPH22P23595 377 aa2.4□□□□□ -2.03
RPB11YOL005C ROX1P25042 368 aa2.4□□□□□ -2.03
RPB11YOL005C YCR022CP25620 114 aa2.4□□□□□ -2.03
RPB11YOL005C FUN19P28003 413 aaPredicted RBP2.4□□□□□ -2.03
RPB11YOL005C SPC110P32380 944 aa2.4□□□□□ -2.03
RPB11YOL005C FRE2P36033 711 aa2.4□□□□□ -2.03
RPB11YOL005C MUM2P38236 366 aa2.4□□□□□ -2.03
RPB11YOL005C KEL1P38853 1164 aaKnown RBP2.4□□□□□ -2.03
RPB11YOL005C UTP9P38882 575 aaKnown RBP2.4□□□□□ -2.03
RPB11YOL005C SMF1P38925 575 aa2.4□□□□□ -2.03
RPB11YOL005C KRE9P39005 276 aa2.4□□□□□ -2.03
RPB11YOL005C CCT4P39078 528 aaKnown RBP2.4□□□□□ -2.03
RPB11YOL005C DHH1P39517 506 aaKnown RBP2.4□□□□□ -2.03
RPB11YOL005C SYG1P40528 902 aa2.4□□□□□ -2.03
RPB11YOL005C RPR2P40571 144 aa2.4□□□□□ -2.03
RPB11YOL005C YJL213WP40896 331 aa2.4□□□□□ -2.03
RPB11YOL005C GPD2P41911 440 aaKnown RBP2.4□□□□□ -2.03
RPB11YOL005C YGR149WP48236 432 aa2.4□□□□□ -2.03
RPB11YOL005C YGL108CP53139 140 aa2.4□□□□□ -2.03
RPB11YOL005C MNP1P53163 194 aaPredicted RBP2.4□□□□□ -2.03
RPB11YOL005C WSC2P53832 503 aa2.4□□□□□ -2.03
RPB11YOL005C TAF11Q04226 346 aa2.4□□□□□ -2.03
RPB11YOL005C YLR287CQ05881 355 aa2.4□□□□□ -2.03
RPB11YOL005C RKM5Q12367 367 aa2.4□□□□□ -2.03
RPB11YOL005C RTN2Q12443 393 aa2.4□□□□□ -2.03
RPB11YOL005C LEU4P06208 619 aaKnown RBP2.39□□□□□ -2.03
RPB11YOL005C CDC31P06704 161 aaKnown RBP2.39□□□□□ -2.03
RPB11YOL005C AMD1P15274 810 aaKnown RBP2.39□□□□□ -2.03
RPB11YOL005C MCK1P21965 375 aaKnown RBP2.39□□□□□ -2.03
RPB11YOL005C SPB1P25582 841 aaPredicted RBP2.39□□□□□ -2.03
RPB11YOL005C RAD14P28519 371 aa2.39□□□□□ -2.03
RPB11YOL005C AGA1P32323 725 aa2.39□□□□□ -2.03
RPB11YOL005C ATP11P32453 318 aa2.39□□□□□ -2.03
RPB11YOL005C SAS3P34218 831 aa2.39□□□□□ -2.03
RPB11YOL005C TUL1P36096 758 aa2.39□□□□□ -2.03
RPB11YOL005C ISC1P40015 477 aaKnown RBP2.39□□□□□ -2.03
RPB11YOL005C ALG8P40351 577 aa2.39□□□□□ -2.03
RPB11YOL005C GWT1P47026 490 aa2.39□□□□□ -2.03
RPB11YOL005C RPM2Q02773 1202 aa2.39□□□□□ -2.03
RPB11YOL005C BNA5Q05979 453 aa2.39□□□□□ -2.03
RPB11YOL005C YTH1Q06102 208 aaPredicted RBP2.39□□□□□ -2.03
RPB11YOL005C RRG1Q12167 365 aaPredicted RBP2.39□□□□□ -2.03
RPB11YOL005C TY1B-DR4Q07793 1604 aa2.39□□□□□ -2.03
RPB11YOL005C HEM2P05373 342 aa2.38□□□□□ -2.03
RPB11YOL005C CLB3P24870 427 aa2.38□□□□□ -2.03
RPB11YOL005C BUB3P26449 341 aa2.38□□□□□ -2.03
RPB11YOL005C PMU1P36069 295 aa2.38□□□□□ -2.03
RPB11YOL005C THI2P38141 450 aa2.38□□□□□ -2.03
RPB11YOL005C RMD9P53140 646 aaKnown RBP2.38□□□□□ -2.03
RPB11YOL005C JJJ1P53863 590 aa2.38□□□□□ -2.03
RPB11YOL005C PIR3Q03180 325 aa2.38□□□□□ -2.03
RPB11YOL005C YMR155WQ03795 547 aa2.38□□□□□ -2.03
RPB11YOL005C RQC1Q05468 723 aaKnown RBP2.38□□□□□ -2.03
RPB11YOL005C RTT103Q05543 409 aa2.38□□□□□ -2.03
RPB11YOL005C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RPB11YOL005C GRX6Q12438 231 aa2.38□□□□□ -2.03
RPB11YOL005C YBR298C-AQ8TGK4 73 aa2.38□□□□□ -2.03
RPB11YOL005C SPA2P23201 1466 aaKnown RBP2.38□□□□□ -2.03
RPB11YOL005C ECM5Q03214 1411 aa2.37□□□□□ -2.03
RPB11YOL005C RHO2P06781 192 aa2.37□□□□□ -2.03
RPB11YOL005C SPS4P09937 338 aa2.37□□□□□ -2.03
RPB11YOL005C YAR066WP0CX18 203 aa2.37□□□□□ -2.03
RPB11YOL005C YHR214WP0CX19 203 aa2.37□□□□□ -2.03
RPB11YOL005C CPR1P14832 162 aaKnown RBP2.37□□□□□ -2.03
RPB11YOL005C PRP16P15938 1071 aaPredicted RBP2.37□□□□□ -2.03
RPB11YOL005C SRV2P17555 526 aaKnown RBP2.37□□□□□ -2.03
RPB11YOL005C ATP10P18496 279 aa2.37□□□□□ -2.03
RPB11YOL005C REC114P32841 428 aa2.37□□□□□ -2.03
RPB11YOL005C NOC2P39744 710 aaKnown RBP2.37□□□□□ -2.03
RPB11YOL005C HAT2P39984 401 aa2.37□□□□□ -2.03
RPB11YOL005C VTC2P43585 828 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms