RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	DPB11	P47027	764 aa	Predicted RBP	4.11	□□□□□ -1.75
UBP10	YNL186W	MSC1	Q03104	513 aa		4.11	□□□□□ -1.75
UBP10	YNL186W	RRP45	Q05636	305 aa	Known RBP	4.11	□□□□□ -1.75
UBP10	YNL186W	YPR172W	Q06608	200 aa		4.11	□□□□□ -1.75
UBP10	YNL186W	YFH1	Q07540	174 aa		4.11	□□□□□ -1.75
UBP10	YNL186W	YLR122C	Q12312	125 aa		4.11	□□□□□ -1.75
UBP10	YNL186W	SIR3	P06701	978 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	CBP1	P07252	654 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	HOM2	P13663	365 aa	Known RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	PHO11	P35842	467 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	YBR139W	P38109	508 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	PHO12	P38693	467 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	MSR1	P38714	643 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	ECM10	P39987	644 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	LOC1	P43586	204 aa	Predicted RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	AMA1	P50082	593 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	MUP1	P50276	574 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	BUD17	P53727	317 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	TDA6	Q06466	467 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	YDR215C	Q12240	137 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	INP53	Q12271	1107 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	SCH9	P11792	824 aa	Known RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	IMG1	P25626	169 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	FUB1	P25659	250 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	CCL1	P37366	393 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	ASC1	P38011	319 aa	Known RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	RFC3	P38629	340 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	IMD2	P38697	523 aa	Known RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	PLB1	P39105	664 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	MNN9	P39107	395 aa	Known RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	FUN12	P39730	1002 aa	Known RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	VHS2	P40463	436 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	YFR020W	P43600	232 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	FAR3	P46671	204 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	URB2	P47108	1174 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	KTR5	P53966	522 aa	Predicted RBP	4.1	□□□□□ -1.75
UBP10	YNL186W	YDR109C	Q04585	715 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	YLR413W	Q06689	675 aa		4.1	□□□□□ -1.75
UBP10	YNL186W	VPS63	O13549	108 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	ARG81	P05085	880 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	YPK1	P12688	680 aa	Known RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	KRS1	P15180	591 aa	Known RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	NDI1	P32340	513 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	NTC20	P38302	140 aa	Predicted RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	MSG5	P38590	489 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	LIN1	P38852	340 aa	Predicted RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	SSO2	P39926	295 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	OPT1	P40897	799 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	CAF130	P53280	1122 aa	Predicted RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	COP1	P53622	1201 aa	Known RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	YMR130W	Q04223	302 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	NDL1	Q06568	189 aa		4.09	□□□□□ -1.75
UBP10	YNL186W	MRPL23	Q12487	163 aa	Predicted RBP	4.09	□□□□□ -1.75
UBP10	YNL186W	HXK2	P04807	486 aa	Known RBP	4.09	□□□□□ -1.76
UBP10	YNL186W	RPL31B	P0C2H9	113 aa	Known RBP	4.09	□□□□□ -1.76
UBP10	YNL186W	GCD2	P12754	651 aa	Predicted RBP	4.09	□□□□□ -1.76
UBP10	YNL186W	RDS1	P25611	832 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	GSH1	P32477	678 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	LNP1	P38878	278 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	RAD17	P48581	401 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	YIP4	P53093	235 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	RMD9	P53140	646 aa	Known RBP	4.09	□□□□□ -1.76
UBP10	YNL186W	SMA2	Q04658	369 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	IRC13	Q08630	104 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	LCB4	Q12246	624 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	YKL033W-A	Q86ZR7	236 aa		4.09	□□□□□ -1.76
UBP10	YNL186W	PET111	P08468	800 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	LAC1	P28496	418 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	PHM8	P40025	321 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	RPA34	P47006	233 aa	Predicted RBP	4.08	□□□□□ -1.76
UBP10	YNL186W	COQ6	P53318	479 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	DIP5	P53388	608 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	TRM44	Q02648	567 aa	Known RBP	4.08	□□□□□ -1.76
UBP10	YNL186W	MFM1	Q02783	413 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	STE23	Q06010	1027 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	ULA1	Q12059	462 aa		4.08	□□□□□ -1.76
UBP10	YNL186W	AAC1	P04710	309 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	CHO2	P05374	869 aa	Known RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	ILV5	P06168	395 aa	Known RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	STE4	P18851	423 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	PRP6	P19735	899 aa	Predicted RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	SAG1	P20840	650 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	CAD1	P24813	409 aa	Known RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	DMC1	P25453	334 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	HIR2	P32480	875 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	SIP1	P32578	815 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	RPF2	P36160	344 aa	Known RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	MMS4	P38257	691 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	ASG1	P40467	964 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	YFR018C	P43599	363 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	AIM22	P47051	409 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	MPS2	P53159	387 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	RRP46	P53256	223 aa	Predicted RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	IST1	P53843	298 aa	Predicted RBP	4.07	□□□□□ -1.76
UBP10	YNL186W	OCA2	P53949	197 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	SLG1	P54867	378 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	SMA1	Q02651	245 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	YDR132C	Q03900	495 aa		4.07	□□□□□ -1.76
UBP10	YNL186W	YLR224W	Q05947	369 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms