RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W PAL1Q05518 499 aaKnown RBP2.39□□□□□ -2.03
UBP15YMR304W ATG17Q06410 417 aa2.39□□□□□ -2.03
UBP15YMR304W MFG1Q07684 458 aa2.39□□□□□ -2.03
UBP15YMR304W UIP4Q08926 304 aa2.39□□□□□ -2.03
UBP15YMR304W BAG7Q12128 409 aa2.39□□□□□ -2.03
UBP15YMR304W GLO4Q12320 285 aa2.39□□□□□ -2.03
UBP15YMR304W MED1Q12321 566 aa2.39□□□□□ -2.03
UBP15YMR304W ECM3Q99252 613 aa2.39□□□□□ -2.03
UBP15YMR304W SCEIP03882 235 aa2.38□□□□□ -2.03
UBP15YMR304W RPL22AP05749 121 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W MSF1P08425 469 aa2.38□□□□□ -2.03
UBP15YMR304W UNG1P12887 359 aa2.38□□□□□ -2.03
UBP15YMR304W SPO11P23179 398 aa2.38□□□□□ -2.03
UBP15YMR304W RVS161P25343 265 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W RHB1P25378 209 aa2.38□□□□□ -2.03
UBP15YMR304W HIS7P33734 552 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W KKQ8P36004 724 aa2.38□□□□□ -2.03
UBP15YMR304W AIM46P38885 310 aa2.38□□□□□ -2.03
UBP15YMR304W TMA108P40462 946 aa2.38□□□□□ -2.03
UBP15YMR304W MAM33P40513 266 aa2.38□□□□□ -2.03
UBP15YMR304W RTS2P40962 232 aa2.38□□□□□ -2.03
UBP15YMR304W NOP13P53883 403 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
UBP15YMR304W SED5Q01590 340 aa2.38□□□□□ -2.03
UBP15YMR304W SMA1Q02651 245 aa2.38□□□□□ -2.03
UBP15YMR304W CTL1Q03220 320 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W DOT1Q04089 582 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W SPC24Q04477 213 aa2.38□□□□□ -2.03
UBP15YMR304W SVF1Q05515 481 aa2.38□□□□□ -2.03
UBP15YMR304W RNH202Q05635 350 aa2.38□□□□□ -2.03
UBP15YMR304W FRE5Q08908 694 aa2.38□□□□□ -2.03
UBP15YMR304W YPL066WQ12194 479 aa2.38□□□□□ -2.03
UBP15YMR304W PAB1P04147 577 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
UBP15YMR304W GPH1P06738 902 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W CUP2P15315 225 aa2.38□□□□□ -2.03
UBP15YMR304W CBF1P17106 351 aa2.38□□□□□ -2.03
UBP15YMR304W MSB1P21339 1137 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W RPB10P22139 70 aa2.38□□□□□ -2.03
UBP15YMR304W MCM5P29496 775 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W FAA1P30624 700 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W MRPL9P31334 269 aa2.38□□□□□ -2.03
UBP15YMR304W APE2P32454 952 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W NIC96P34077 839 aa2.38□□□□□ -2.03
UBP15YMR304W PTK1P36002 662 aaPredicted RBP2.38□□□□□ -2.03
UBP15YMR304W UTP9P38882 575 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W BFR1P38934 470 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03 RIP-Chip
UBP15YMR304W SEO1P39709 593 aa2.38□□□□□ -2.03
UBP15YMR304W SAW1P39735 261 aa2.38□□□□□ -2.03
UBP15YMR304W GIP2P40036 548 aa2.38□□□□□ -2.03
UBP15YMR304W DDI1P40087 428 aa2.38□□□□□ -2.03
UBP15YMR304W CIN5P40917 295 aa2.38□□□□□ -2.03
UBP15YMR304W SNG1P46950 547 aa2.38□□□□□ -2.03
UBP15YMR304W YNR065CP53751 1116 aa2.38□□□□□ -2.03
UBP15YMR304W ATG4P53867 494 aa2.38□□□□□ -2.03
UBP15YMR304W ASI2P53895 289 aa2.38□□□□□ -2.03
UBP15YMR304W AAT1Q01802 451 aa2.38□□□□□ -2.03
UBP15YMR304W MRPS16Q02608 121 aa2.38□□□□□ -2.03
UBP15YMR304W PET117Q02771 107 aa2.38□□□□□ -2.03
UBP15YMR304W YPL080CQ02826 108 aa2.38□□□□□ -2.03
UBP15YMR304W YMD8Q03697 442 aa2.38□□□□□ -2.03
UBP15YMR304W YLR173WQ06247 608 aa2.38□□□□□ -2.03
UBP15YMR304W YPR147CQ06522 304 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W GPM2Q12008 311 aa2.38□□□□□ -2.03
UBP15YMR304W SMF3Q12078 473 aaPredicted RBP2.38□□□□□ -2.03
UBP15YMR304W HUA2Q12134 243 aa2.38□□□□□ -2.03
UBP15YMR304W ILV2P07342 687 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W CIT2P08679 460 aa2.38□□□□□ -2.03
UBP15YMR304W BAR1P12630 587 aa2.38□□□□□ -2.03
UBP15YMR304W SAC7P17121 654 aa2.38□□□□□ -2.03
UBP15YMR304W SGF29P25554 259 aa2.38□□□□□ -2.03
UBP15YMR304W APL1P27351 700 aa2.38□□□□□ -2.03
UBP15YMR304W SPT14P32363 452 aa2.38□□□□□ -2.03
UBP15YMR304W MVD1P32377 396 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W VPS21P36017 210 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W YPK3P38070 525 aa2.38□□□□□ -2.03
UBP15YMR304W AIM18P38884 321 aa2.38□□□□□ -2.03
UBP15YMR304W YIL165CP40446 119 aa2.38□□□□□ -2.03
UBP15YMR304W LSM8P47093 109 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W ASK10P48361 1146 aa2.38□□□□□ -2.03
UBP15YMR304W IMA1P53051 589 aa2.38□□□□□ -2.03
UBP15YMR304W PBP1P53297 722 aaKnown RBP2.38□□□□□ -2.03
UBP15YMR304W HDA1P53973 706 aa2.38□□□□□ -2.03
UBP15YMR304W ADY4Q05955 493 aa2.38□□□□□ -2.03
UBP15YMR304W SPO77Q06134 477 aa2.38□□□□□ -2.03
UBP15YMR304W NTO1Q12311 748 aa2.38□□□□□ -2.03
UBP15YMR304W MRPL23Q12487 163 aaPredicted RBP2.38□□□□□ -2.03
UBP15YMR304W PCD1Q12524 340 aa2.38□□□□□ -2.03
UBP15YMR304W YPL119C-AQ3E751 87 aa2.38□□□□□ -2.03
UBP15YMR304W CKI1P20485 582 aa2.37□□□□□ -2.03
UBP15YMR304W VPS34P22543 875 aa2.37□□□□□ -2.03
UBP15YMR304W CLB2P24869 491 aa2.37□□□□□ -2.03
UBP15YMR304W ABD1P32783 436 aaPredicted RBP2.37□□□□□ -2.03
UBP15YMR304W SIP2P34164 415 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W UTP30P36144 274 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W YPT31P38555 223 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W TVP23P38962 199 aa2.37□□□□□ -2.03
UBP15YMR304W NPT1P39683 429 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W VRG4P40107 337 aa2.37□□□□□ -2.03
UBP15YMR304W GAB1P41733 394 aa2.37□□□□□ -2.03
UBP15YMR304W GSM1P42950 618 aa2.37□□□□□ -2.03
UBP15YMR304W TRS85P46944 698 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms