RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	UBC6	P33296	250 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM1	YMR301C	MTG2	P38860	518 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	YHR210C	P38893	341 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	CCT4	P39078	528 aa	Known RBP	4.54	□□□□□ -1.68
ATM1	YMR301C	PTI1	P39927	425 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM1	YMR301C	SIT1	P39980	628 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	HAT2	P39984	401 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	ATG23	Q06671	453 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	YOR114W	Q12219	294 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	UBX3	Q12229	455 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	LAG2	Q92325	660 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	PET111	P08468	800 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	RPS4A	P0CX35	261 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	RPS4B	P0CX36	261 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	MET8	P15807	274 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	HEM15	P16622	393 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	SEC14	P24280	304 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	CLB1	P24868	471 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	BUB3	P26449	341 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	PTP2	P29461	750 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	REI1	P38344	393 aa	Predicted RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	MPH1	P40562	993 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	ELP2	P42935	788 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	IKS1	P47042	667 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	BOL2	P53082	120 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	MPS2	P53159	387 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	BUD32	P53323	261 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	HOS3	Q02959	697 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	SVL3	Q03088	825 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	MET32	Q12041	191 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
ATM1	YMR301C	YPR071W	Q12346	211 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	GPA2	P10823	449 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	KAR4	P25583	335 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	PRO1	P32264	428 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	SSH4	P32343	579 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	PRP19	P32523	503 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	SFA1	P32771	386 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	NIC96	P34077	839 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	CTP1	P38152	299 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	EHT1	P38295	451 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	FTH1	P38310	465 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	GIC1	P38785	314 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	BEM4	P39011	633 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	INA22	P40576	216 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	STB2	P46679	850 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	HOS2	P53096	452 aa	Predicted RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	YGR015C	P53208	328 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	CLD1	P53264	445 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	SUR7	P54003	302 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	ADE12	P80210	433 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	PEX25	Q02969	394 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	GOT1	Q03554	138 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	TAF12	Q03761	539 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	YMR027W	Q04371	470 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	VID22	Q05934	901 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	YTM1	Q12024	460 aa	Predicted RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	HAL9	Q12180	1030 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	RMP1	Q12530	201 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	YMR030W-A	Q3E760	96 aa		4.53	□□□□□ -1.68
ATM1	YMR301C	PNO1	Q99216	274 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	CYR1	P08678	2026 aa	Known RBP	4.53	□□□□□ -1.68
ATM1	YMR301C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-DR6	P0CX70	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-ER1	P0CX71	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-LR2	P0CX72	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-PL	P0CX73	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-JR1	P0CX74	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-LR3	P0CX75	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-ML2	P0CX76	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	PRP2	P20095	876 aa	Predicted RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	ARG1	P22768	420 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	RAD51	P25454	400 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	MLS1	P30952	554 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	PTM1	P32857	523 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	BEM3	P32873	1128 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	CYM1	P32898	989 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	INM1	P38710	295 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	MUP3	P38734	546 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	VRG4	P40107	337 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	YIL086C	P40503	102 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	PBP1	P53297	722 aa	Known RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	SRP1	Q02821	542 aa	Known RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	RSF1	Q05043	376 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-GR1	Q12085	440 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	TY1A-OL	Q92392	440 aa	Known RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	CDC9	P04819	755 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	SKT5	P34226	696 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	SEF1	P34228	1148 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	BYE1	P36106	594 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	MRPL15	P36523	253 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	MRPL16	P38064	232 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	ALG3	P38179	458 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	AZF1	P41696	914 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	SEC27	P41811	889 aa	Known RBP	4.52	□□□□□ -1.69
ATM1	YMR301C	IBA57	P47158	497 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	YJR149W	P47177	404 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	ASK10	P48361	1146 aa		4.52	□□□□□ -1.69
ATM1	YMR301C	YGL260W	P53056	76 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms