RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C YJL068CP40363 299 aa3.26□□□□□ -1.89
YMR046CYMR046C ALK1P43633 760 aaKnown RBP3.26□□□□□ -1.89
YMR046CYMR046C YGL082WP53155 381 aa3.26□□□□□ -1.89
YMR046CYMR046C CUL3P53202 744 aa3.26□□□□□ -1.89
YMR046CYMR046C TWF1P53250 332 aa3.26□□□□□ -1.89
YMR046CYMR046C RQC1Q05468 723 aaKnown RBP3.26□□□□□ -1.89
YMR046CYMR046C YEH2Q07950 538 aa3.26□□□□□ -1.89
YMR046CYMR046C THI20Q08224 551 aa3.26□□□□□ -1.89
YMR046CYMR046C NRT1Q08485 598 aa3.26□□□□□ -1.89
YMR046CYMR046C SEC39Q12745 709 aa3.26□□□□□ -1.89
YMR046CYMR046C NUP159P40477 1460 aa3.26□□□□□ -1.89
YMR046CYMR046C SNQ2P32568 1501 aaKnown RBP3.26□□□□□ -1.89
YMR046CYMR046C TY1B-DR3Q99231 1755 aa3.26□□□□□ -1.89
YMR046CYMR046C SEC62P21825 274 aa3.25□□□□□ -1.89
YMR046CYMR046C SEC66P33754 206 aa3.25□□□□□ -1.89
YMR046CYMR046C GCS1P35197 352 aa3.25□□□□□ -1.89
YMR046CYMR046C CMC1P36064 111 aa3.25□□□□□ -1.89
YMR046CYMR046C BYE1P36106 594 aa3.25□□□□□ -1.89
YMR046CYMR046C YJR154WP47181 346 aa3.25□□□□□ -1.89
YMR046CYMR046C ALT2P52892 507 aa3.25□□□□□ -1.89
YMR046CYMR046C CAF130P53280 1122 aaPredicted RBP3.25□□□□□ -1.89
YMR046CYMR046C YGR250CP53316 781 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C YMR155WQ03795 547 aa3.25□□□□□ -1.89
YMR046CYMR046C YMR087WQ04299 284 aa3.25□□□□□ -1.89
YMR046CYMR046C GEA2P39993 1459 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-HO13535 1793 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-DR5P0C2I2 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-DR6P0C2I3 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-LR2P0C2I5 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-LR3P0C2I6 1755 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-PR1P0C2I9 1755 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-PR2P0C2J0 1756 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-PR3P0C2J1 1755 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-JR1P47098 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-ML2Q03434 1755 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-ER1Q03612 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-ML1Q04711 1755 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-BRQ12193 1756 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-GR2Q12269 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-OLQ12273 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-GR3Q12316 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C TY1B-PLQ12414 1755 aaKnown RBP3.25□□□□□ -1.89
YMR046CYMR046C TY1B-ORQ92393 1755 aa3.25□□□□□ -1.89
YMR046CYMR046C APE1P14904 514 aa3.24□□□□□ -1.89
YMR046CYMR046C PDX1P16451 410 aa3.24□□□□□ -1.89
YMR046CYMR046C PRP2P20095 876 aaPredicted RBP3.24□□□□□ -1.89
YMR046CYMR046C PPZ1P26570 692 aa3.24□□□□□ -1.89
YMR046CYMR046C PMT1P33775 817 aa3.24□□□□□ -1.89
YMR046CYMR046C YNK1P36010 153 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C DUG2P38149 878 aa3.24□□□□□ -1.89
YMR046CYMR046C BNA4P38169 460 aa3.24□□□□□ -1.89
YMR046CYMR046C TCM62P38228 572 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C OSH3P38713 996 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C OTU2P38747 307 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C MBB1P39534 108 aa3.24□□□□□ -1.89
YMR046CYMR046C TIF4631P39935 952 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C YTA12P40341 825 aa3.24□□□□□ -1.89
YMR046CYMR046C CSM2P40465 213 aa3.24□□□□□ -1.89
YMR046CYMR046C DIM1P41819 318 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C MEP2P41948 499 aa3.24□□□□□ -1.89
YMR046CYMR046C NDD1Q08887 554 aa3.24□□□□□ -1.89
YMR046CYMR046C YDL007C-AQ2V2Q0 85 aa3.24□□□□□ -1.89
YMR046CYMR046C YOL159C-AQ3E769 90 aa3.24□□□□□ -1.89
YMR046CYMR046C DNF1P32660 1571 aa3.24□□□□□ -1.89
YMR046CYMR046C RPA190P10964 1664 aaKnown RBP3.24□□□□□ -1.89
YMR046CYMR046C COR1P07256 457 aa3.23□□□□□ -1.89
YMR046CYMR046C PMS1P14242 873 aa3.23□□□□□ -1.89
YMR046CYMR046C CLB3P24870 427 aa3.23□□□□□ -1.89
YMR046CYMR046C RPC53P25441 422 aa3.23□□□□□ -1.89
YMR046CYMR046C MSN2P33748 704 aa3.23□□□□□ -1.89
YMR046CYMR046C RTT107P38850 1070 aa3.23□□□□□ -1.89
YMR046CYMR046C YAT2P40017 923 aa3.23□□□□□ -1.89
YMR046CYMR046C YJL070CP40361 888 aa3.23□□□□□ -1.89
YMR046CYMR046C GPD2P41911 440 aaKnown RBP3.23□□□□□ -1.89
YMR046CYMR046C HXT14P42833 540 aa3.23□□□□□ -1.89
YMR046CYMR046C SCD6P45978 349 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
YMR046CYMR046C ZPR1P53303 486 aaKnown RBP3.23□□□□□ -1.89
YMR046CYMR046C HEF3P53978 1044 aaKnown RBP3.23□□□□□ -1.89
YMR046CYMR046C PDS5Q04264 1277 aa3.23□□□□□ -1.89
YMR046CYMR046C DRS2P39524 1355 aa3.23□□□□□ -1.89
YMR046CYMR046C YML133CQ03099 1374 aa3.23□□□□□ -1.89
YMR046CYMR046C YLL067CQ07888 1374 aa3.23□□□□□ -1.89
YMR046CYMR046C YLL066CQ99208 1374 aa3.23□□□□□ -1.89
YMR046CYMR046C VPS15P22219 1454 aa3.23□□□□□ -1.89
YMR046CYMR046C SUC2P00724 532 aa3.22□□□□□ -1.89
YMR046CYMR046C RPL31BP0C2H9 113 aaKnown RBP3.22□□□□□ -1.89
YMR046CYMR046C VPS52P39904 641 aa3.22□□□□□ -1.89
YMR046CYMR046C IKS1P47042 667 aa3.22□□□□□ -1.89
YMR046CYMR046C SLD5Q03406 294 aa3.22□□□□□ -1.89
YMR046CYMR046C YDR131CQ03899 556 aa3.22□□□□□ -1.89
YMR046CYMR046C IVY1Q04934 453 aa3.22□□□□□ -1.89
YMR046CYMR046C DAP1Q12091 152 aa3.22□□□□□ -1.89
YMR046CYMR046C MLP2P40457 1679 aa3.22□□□□□ -1.89
YMR046CYMR046C NTE1Q04958 1679 aa3.22□□□□□ -1.89
YMR046CYMR046C CAT8P39113 1433 aa3.22□□□□□ -1.89
YMR046CYMR046C SNT2P53127 1403 aa3.22□□□□□ -1.89
YMR046CYMR046C PDR15Q04182 1529 aaKnown RBP3.22□□□□□ -1.89
YMR046CYMR046C CLC1P17891 233 aa3.21□□□□□ -1.89
YMR046CYMR046C UTR4P32626 227 aa3.21□□□□□ -1.89
YMR046CYMR046C FRE1P32791 686 aa3.21□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms