RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C FLC2P39719 783 aa3.4□□□□□ -1.87
SUB1YMR039C ALG5P40350 334 aa3.4□□□□□ -1.87
SUB1YMR039C GWT1P47026 490 aa3.4□□□□□ -1.87
SUB1YMR039C VID30P53076 958 aa3.4□□□□□ -1.87
SUB1YMR039C IPI3P53877 555 aa3.4□□□□□ -1.87
SUB1YMR039C HEL2Q05580 639 aaKnown RBP3.4□□□□□ -1.87
SUB1YMR039C RBS1Q05672 457 aaKnown RBP3.4□□□□□ -1.87
SUB1YMR039C COQ9Q05779 260 aa3.4□□□□□ -1.87
SUB1YMR039C YEH1Q07804 573 aa3.4□□□□□ -1.87
SUB1YMR039C YPT6Q99260 215 aa3.4□□□□□ -1.87
SUB1YMR039C FUN19P28003 413 aaPredicted RBP3.39□□□□□ -1.87
SUB1YMR039C NOP4P37838 685 aaKnown RBP3.39□□□□□ -1.87
SUB1YMR039C DED81P38707 554 aaKnown RBP3.39□□□□□ -1.87
SUB1YMR039C NGL3Q03210 505 aa3.39□□□□□ -1.87
SUB1YMR039C ADD37Q03233 198 aa3.39□□□□□ -1.87
SUB1YMR039C CFT2Q12102 859 aaPredicted RBP3.39□□□□□ -1.87
SUB1YMR039C RRP12Q12754 1228 aaKnown RBP3.39□□□□□ -1.87
SUB1YMR039C SPT15P13393 240 aaKnown RBP3.38□□□□□ -1.87
SUB1YMR039C AAC3P18238 307 aa3.38□□□□□ -1.87
SUB1YMR039C AIM22P47051 409 aa3.38□□□□□ -1.87
SUB1YMR039C UPF3P48412 387 aaKnown RBP3.38□□□□□ -1.87
SUB1YMR039C BTN2P53286 410 aa3.38□□□□□ -1.87
SUB1YMR039C RBG2P53295 368 aaKnown RBP3.38□□□□□ -1.87
SUB1YMR039C KEL3Q08979 651 aaPredicted RBP3.38□□□□□ -1.87
SUB1YMR039C RCN2Q12044 265 aa3.38□□□□□ -1.87
SUB1YMR039C CPR1P14832 162 aaKnown RBP3.37□□□□□ -1.87
SUB1YMR039C GLK1P17709 500 aaKnown RBP3.37□□□□□ -1.87
SUB1YMR039C PRP2P20095 876 aaPredicted RBP3.37□□□□□ -1.87
SUB1YMR039C PAP1P29468 568 aaKnown RBP3.37□□□□□ -1.87
SUB1YMR039C BLI1P35727 113 aa3.37□□□□□ -1.87
SUB1YMR039C REG2P38232 338 aa3.37□□□□□ -1.87
SUB1YMR039C MSR1P38714 643 aa3.37□□□□□ -1.87
SUB1YMR039C FAA2P39518 744 aa3.37□□□□□ -1.87
SUB1YMR039C PRE5P40302 234 aaKnown RBP3.37□□□□□ -1.87
SUB1YMR039C VTC2P43585 828 aa3.37□□□□□ -1.87
SUB1YMR039C IMD4P50094 524 aaKnown RBP3.37□□□□□ -1.87
SUB1YMR039C HEF3P53978 1044 aaKnown RBP3.37□□□□□ -1.87
SUB1YMR039C SCM3Q12334 223 aa3.37□□□□□ -1.87
SUB1YMR039C BRR1Q99177 341 aaPredicted RBP3.37□□□□□ -1.87
SUB1YMR039C MUM2P38236 366 aa3.36□□□□□ -1.87
SUB1YMR039C CAF40P53829 373 aa3.36□□□□□ -1.87
SUB1YMR039C FIN1Q03898 291 aa3.36□□□□□ -1.87
SUB1YMR039C YOR387CQ08910 206 aa3.36□□□□□ -1.87
SUB1YMR039C YJR112W-AQ3E743 109 aa3.36□□□□□ -1.87
SUB1YMR039C HIP1P06775 603 aa3.35□□□□□ -1.87
SUB1YMR039C PRD1P25375 712 aa3.35□□□□□ -1.87
SUB1YMR039C TCD2P36101 447 aaKnown RBP3.35□□□□□ -1.87
SUB1YMR039C RFS1P38234 210 aaKnown RBP3.35□□□□□ -1.87
SUB1YMR039C UTP9P38882 575 aaKnown RBP3.35□□□□□ -1.87
SUB1YMR039C FAU1P40099 211 aa3.35□□□□□ -1.87
SUB1YMR039C IRC6P43615 237 aa3.35□□□□□ -1.87
SUB1YMR039C YGR066CP53242 292 aa3.35□□□□□ -1.87
SUB1YMR039C ZPR1P53303 486 aaKnown RBP3.35□□□□□ -1.87
SUB1YMR039C RPC11Q04307 110 aaPredicted RBP3.35□□□□□ -1.87
SUB1YMR039C RRN11Q04712 507 aa3.35□□□□□ -1.87
SUB1YMR039C VPS38Q05919 439 aa3.35□□□□□ -1.87
SUB1YMR039C CTI6Q08923 506 aa3.35□□□□□ -1.87
SUB1YMR039C RLM1Q12224 676 aa3.35□□□□□ -1.87
SUB1YMR039C ERV2Q12284 196 aa3.35□□□□□ -1.87
SUB1YMR039C CBS1P14066 229 aa3.34□□□□□ -1.87
SUB1YMR039C MET8P15807 274 aa3.34□□□□□ -1.87
SUB1YMR039C HEM15P16622 393 aa3.34□□□□□ -1.87
SUB1YMR039C NAM9P27929 486 aa3.34□□□□□ -1.87
SUB1YMR039C DEG1P31115 442 aaKnown RBP3.34□□□□□ -1.87
SUB1YMR039C YEL045CP32616 141 aa3.34□□□□□ -1.87
SUB1YMR039C YME1P32795 747 aa3.34□□□□□ -1.87
SUB1YMR039C MRP4P32902 394 aa3.34□□□□□ -1.87
SUB1YMR039C YBL059WP34224 193 aa3.34□□□□□ -1.87
SUB1YMR039C ARK1P53974 638 aa3.34□□□□□ -1.87
SUB1YMR039C PIR3Q03180 325 aa3.34□□□□□ -1.87
SUB1YMR039C YLR287CQ05881 355 aa3.34□□□□□ -1.87
SUB1YMR039C MES1P00958 751 aaKnown RBP3.33□□□□□ -1.88
SUB1YMR039C GAL80P04387 435 aa3.33□□□□□ -1.88
SUB1YMR039C SUP35P05453 685 aaKnown RBP3.33□□□□□ -1.88
SUB1YMR039C COR1P07256 457 aa3.33□□□□□ -1.88
SUB1YMR039C BUB3P26449 341 aa3.33□□□□□ -1.88
SUB1YMR039C YIM1P28625 365 aa3.33□□□□□ -1.88
SUB1YMR039C NPL6P32832 435 aa3.33□□□□□ -1.88
SUB1YMR039C PAD1P33751 242 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SUB1YMR039C MBB1P39534 108 aa3.33□□□□□ -1.88
SUB1YMR039C GCD10P41814 478 aa3.33□□□□□ -1.88
SUB1YMR039C YGR210CP42942 411 aa3.33□□□□□ -1.88
SUB1YMR039C RMD8P43620 662 aa3.33□□□□□ -1.88
SUB1YMR039C URB2P47108 1174 aa3.33□□□□□ -1.88
SUB1YMR039C MRX6P48564 524 aa3.33□□□□□ -1.88
SUB1YMR039C MRPL19P53875 158 aa3.33□□□□□ -1.88
SUB1YMR039C ELP3Q02908 557 aaKnown RBP3.33□□□□□ -1.88
SUB1YMR039C PAL1Q05518 499 aaKnown RBP3.33□□□□□ -1.88
SUB1YMR039C RKM5Q12367 367 aa3.33□□□□□ -1.88
SUB1YMR039C AVL9Q12500 764 aa3.33□□□□□ -1.88
SUB1YMR039C HHF1P02309 103 aaKnown RBP3.32□□□□□ -1.88
SUB1YMR039C GCN4P03069 281 aa3.32□□□□□ -1.88
SUB1YMR039C FUR1P18562 216 aaKnown RBP3.32□□□□□ -1.88
SUB1YMR039C OLE1P21147 510 aaKnown RBP3.32□□□□□ -1.88
SUB1YMR039C CRM1P30822 1084 aaKnown RBP3.32□□□□□ -1.88
SUB1YMR039C NDI1P32340 513 aa3.32□□□□□ -1.88
SUB1YMR039C ATP11P32453 318 aa3.32□□□□□ -1.88
SUB1YMR039C PEX5P35056 612 aa3.32□□□□□ -1.88
SUB1YMR039C RRT2P38332 387 aa3.32□□□□□ -1.88
SUB1YMR039C NDT80P38830 627 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms