RNA–Protein interactions for RNA: YML118W

NGL3, Transcript of 3'-5' exonuclease specific for poly-A RNAs, yeast

Gene NGL3, Length 1,518 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGL3	YML118W	YDL057W	Q07379	328 aa		4.3	□□□□□ -1.72
NGL3	YML118W	YMR084W	A2P2R3	262 aa		4.29	□□□□□ -1.72
NGL3	YML118W	ADE5,7	P07244	802 aa	Known RBP	4.29	□□□□□ -1.72
NGL3	YML118W	PEP4	P07267	405 aa	Known RBP	4.29	□□□□□ -1.72
NGL3	YML118W	GEX1	P25596	615 aa		4.29	□□□□□ -1.72
NGL3	YML118W	MRPL40	P36534	297 aa		4.29	□□□□□ -1.72
NGL3	YML118W	ASC1	P38011	319 aa	Known RBP	4.29	□□□□□ -1.72
NGL3	YML118W	OPY1	P38271	328 aa		4.29	□□□□□ -1.72
NGL3	YML118W	VHC1	P38329	1120 aa		4.29	□□□□□ -1.72
NGL3	YML118W	EXO1	P39875	702 aa		4.29	□□□□□ -1.72
NGL3	YML118W	ULP2	P40537	1034 aa	Predicted RBP	4.29	□□□□□ -1.72
NGL3	YML118W	MKT1	P40850	830 aa	Known RBP	4.29	□□□□□ -1.72
NGL3	YML118W	CDC1	P40986	491 aa		4.29	□□□□□ -1.72
NGL3	YML118W	YMR206W	Q03695	313 aa		4.29	□□□□□ -1.72
NGL3	YML118W	GRX3	Q03835	250 aa		4.29	□□□□□ -1.72
NGL3	YML118W	YOR389W	Q08912	624 aa		4.29	□□□□□ -1.72
NGL3	YML118W	CFT1	Q06632	1357 aa	Known RBP	4.29	□□□□□ -1.72
NGL3	YML118W	RIP1	P08067	215 aa		4.28	□□□□□ -1.72
NGL3	YML118W	PMR1	P13586	950 aa		4.28	□□□□□ -1.72
NGL3	YML118W	CLB2	P24869	491 aa		4.28	□□□□□ -1.72
NGL3	YML118W	KRE2	P27809	442 aa		4.28	□□□□□ -1.72
NGL3	YML118W	BEM1	P29366	551 aa		4.28	□□□□□ -1.72
NGL3	YML118W	NDI1	P32340	513 aa		4.28	□□□□□ -1.72
NGL3	YML118W	RIM1	P32445	135 aa	Known RBP	4.28	□□□□□ -1.72
NGL3	YML118W	SHP1	P34223	423 aa		4.28	□□□□□ -1.72
NGL3	YML118W	MIA40	P36046	403 aa		4.28	□□□□□ -1.72
NGL3	YML118W	YHR131C	P38835	850 aa		4.28	□□□□□ -1.72
NGL3	YML118W	VPS45	P38932	577 aa		4.28	□□□□□ -1.72
NGL3	YML118W	RPA34	P47006	233 aa	Predicted RBP	4.28	□□□□□ -1.72
NGL3	YML118W	RMD9	P53140	646 aa	Known RBP	4.28	□□□□□ -1.72
NGL3	YML118W	ALF1	P53904	254 aa		4.28	□□□□□ -1.72
NGL3	YML118W	HEF3	P53978	1044 aa	Known RBP	4.28	□□□□□ -1.72
NGL3	YML118W	ABZ2	Q03266	374 aa		4.28	□□□□□ -1.72
NGL3	YML118W	THP1	Q08231	455 aa		4.28	□□□□□ -1.72
NGL3	YML118W	NCE102	Q12207	173 aa	RIP-Chip data	4.28	□□□□□ -1.72	not detected
NGL3	YML118W	MYO2	P19524	1574 aa	Known RBP	4.28	□□□□□ -1.72
NGL3	YML118W	YER145C-A	A0A023PYF4	145 aa		4.27	□□□□□ -1.73
NGL3	YML118W	SGV1	P23293	657 aa	Known RBP	4.27	□□□□□ -1.73
NGL3	YML118W	YCR006C	P25350	157 aa		4.27	□□□□□ -1.73
NGL3	YML118W	EMP70	P32802	667 aa		4.27	□□□□□ -1.73
NGL3	YML118W	VPS17	P32913	551 aa		4.27	□□□□□ -1.73
NGL3	YML118W	ARP1	P38696	384 aa		4.27	□□□□□ -1.73
NGL3	YML118W	KEL1	P38853	1164 aa	Known RBP	4.27	□□□□□ -1.73
NGL3	YML118W	YIP5	P53108	310 aa		4.27	□□□□□ -1.73
NGL3	YML118W	PRM1	P53835	661 aa		4.27	□□□□□ -1.73
NGL3	YML118W	TIM11	P81449	96 aa	Predicted RBP	4.27	□□□□□ -1.73
NGL3	YML118W	UTP6	Q02354	440 aa	Known RBP	4.27	□□□□□ -1.73
NGL3	YML118W	MUK1	Q02866	612 aa		4.27	□□□□□ -1.73
NGL3	YML118W	ADE13	Q05911	482 aa	Known RBP	4.27	□□□□□ -1.73
NGL3	YML118W	ATG26	Q06321	1198 aa		4.27	□□□□□ -1.73
NGL3	YML118W	YLH47	Q06493	454 aa		4.27	□□□□□ -1.73
NGL3	YML118W	NDL1	Q06568	189 aa		4.27	□□□□□ -1.73
NGL3	YML118W	RKM1	Q08961	583 aa	Predicted RBP	4.27	□□□□□ -1.73
NGL3	YML118W	CEX1	Q12453	761 aa		4.27	□□□□□ -1.73
NGL3	YML118W	PFK27	Q12471	397 aa	Predicted RBP	4.27	□□□□□ -1.73
NGL3	YML118W	ILV5	P06168	395 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	STE3	P06783	470 aa		4.26	□□□□□ -1.73
NGL3	YML118W	GPA1	P08539	472 aa		4.26	□□□□□ -1.73
NGL3	YML118W	SCH9	P11792	824 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	CTS1	P29029	562 aa		4.26	□□□□□ -1.73
NGL3	YML118W	PMI40	P29952	429 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	YHR210C	P38893	341 aa		4.26	□□□□□ -1.73
NGL3	YML118W	VPS41	P38959	992 aa		4.26	□□□□□ -1.73
NGL3	YML118W	YER130C	P39959	443 aa		4.26	□□□□□ -1.73
NGL3	YML118W	YMR147W	P40218	223 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	AIP1	P46680	615 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	SNG1	P46950	547 aa		4.26	□□□□□ -1.73
NGL3	YML118W	PYK2	P52489	506 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	KTR5	P53966	522 aa	Predicted RBP	4.26	□□□□□ -1.73
NGL3	YML118W	KIN4	Q01919	800 aa		4.26	□□□□□ -1.73
NGL3	YML118W	MRPL1	Q04599	285 aa		4.26	□□□□□ -1.73
NGL3	YML118W	SUT2	Q12286	268 aa		4.26	□□□□□ -1.73
NGL3	YML118W	BUD4	P47136	1447 aa		4.26	□□□□□ -1.73
NGL3	YML118W	ATP10	P18496	279 aa		4.26	□□□□□ -1.73
NGL3	YML118W	NUP1	P20676	1076 aa		4.26	□□□□□ -1.73
NGL3	YML118W	MAK32	P23060	363 aa		4.26	□□□□□ -1.73
NGL3	YML118W	CNA1	P23287	553 aa		4.26	□□□□□ -1.73
NGL3	YML118W	RHB1	P25378	209 aa		4.26	□□□□□ -1.73
NGL3	YML118W	RDS1	P25611	832 aa		4.26	□□□□□ -1.73
NGL3	YML118W	SIN4	P32259	974 aa		4.26	□□□□□ -1.73
NGL3	YML118W	MSS51	P32335	436 aa		4.26	□□□□□ -1.73
NGL3	YML118W	TRM2	P33753	639 aa		4.26	□□□□□ -1.73
NGL3	YML118W	BNA4	P38169	460 aa		4.26	□□□□□ -1.73
NGL3	YML118W	TCM62	P38228	572 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	ERV46	P39727	415 aa		4.26	□□□□□ -1.73
NGL3	YML118W	UBP5	P39944	805 aa		4.26	□□□□□ -1.73
NGL3	YML118W	BPL1	P48445	690 aa	Predicted RBP	4.26	□□□□□ -1.73
NGL3	YML118W	LYS20	P48570	428 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	RPN14	P53196	417 aa		4.26	□□□□□ -1.73
NGL3	YML118W	DUG3	P53871	357 aa		4.26	□□□□□ -1.73
NGL3	YML118W	GIS1	Q03833	894 aa		4.26	□□□□□ -1.73
NGL3	YML118W	RRB1	Q04225	511 aa	Known RBP	4.26	□□□□□ -1.73
NGL3	YML118W	VPS20	Q04272	221 aa		4.26	□□□□□ -1.73
NGL3	YML118W	MSC3	Q05812	728 aa		4.26	□□□□□ -1.73
NGL3	YML118W	MDM30	Q05930	598 aa		4.26	□□□□□ -1.73
NGL3	YML118W	POS5	Q06892	414 aa		4.26	□□□□□ -1.73
NGL3	YML118W	SFG1	Q12507	346 aa		4.26	□□□□□ -1.73
NGL3	YML118W	BRR1	Q99177	341 aa	Predicted RBP	4.26	□□□□□ -1.73
NGL3	YML118W	BI2	P03873	423 aa		4.25	□□□□□ -1.73
NGL3	YML118W	LEU4	P06208	619 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms