RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W MED2Q12124 431 aa4.86□□□□□ -1.63
VPS36YLR417W RPN5Q12250 445 aaKnown RBP4.86□□□□□ -1.63
VPS36YLR417W SPT6P23615 1451 aaKnown RBP4.86□□□□□ -1.63
VPS36YLR417W TYR1P20049 452 aa4.85□□□□□ -1.63
VPS36YLR417W SGV1P23293 657 aaKnown RBP4.85□□□□□ -1.63
VPS36YLR417W YHR054CP38780 354 aa4.85□□□□□ -1.63
VPS36YLR417W KEL1P38853 1164 aaKnown RBP4.85□□□□□ -1.63
VPS36YLR417W FLO5P38894 1075 aa4.85□□□□□ -1.63
VPS36YLR417W IAH1P41734 238 aa4.85□□□□□ -1.63
VPS36YLR417W YNL181WP53878 407 aa4.85□□□□□ -1.63
VPS36YLR417W EKI1Q03764 534 aa4.85□□□□□ -1.63
VPS36YLR417W YMR130WQ04223 302 aa4.85□□□□□ -1.63
VPS36YLR417W HEL2Q05580 639 aaKnown RBP4.85□□□□□ -1.63
VPS36YLR417W GSH2Q08220 491 aa4.85□□□□□ -1.63
VPS36YLR417W UAF30Q08747 228 aa4.85□□□□□ -1.63
VPS36YLR417W VAM3Q12241 283 aa4.85□□□□□ -1.63
VPS36YLR417W ARP6Q12509 438 aa4.85□□□□□ -1.63
VPS36YLR417W RIP1P08067 215 aa4.84□□□□□ -1.63
VPS36YLR417W YER190C-BP0CX94 160 aa4.84□□□□□ -1.63
VPS36YLR417W YEL077W-AP0CX95 160 aa4.84□□□□□ -1.63
VPS36YLR417W YGR296C-BP0CX96 160 aa4.84□□□□□ -1.63
VPS36YLR417W YPL283W-BP0CX97 160 aa4.84□□□□□ -1.63
VPS36YLR417W YPR204C-AP0CX98 160 aa4.84□□□□□ -1.63
VPS36YLR417W ATP10P18496 279 aa4.84□□□□□ -1.63
VPS36YLR417W URA4P20051 364 aa4.84□□□□□ -1.63
VPS36YLR417W BRF1P29056 596 aa4.84□□□□□ -1.63
VPS36YLR417W CUE2P36075 443 aaKnown RBP4.84□□□□□ -1.63
VPS36YLR417W VHC1P38329 1120 aa4.84□□□□□ -1.63
VPS36YLR417W TFG2P41896 400 aaPredicted RBP4.84□□□□□ -1.63
VPS36YLR417W PSA1P41940 361 aaKnown RBP4.84□□□□□ -1.63
VPS36YLR417W RIM13Q03792 727 aa4.84□□□□□ -1.63
VPS36YLR417W APL5Q08951 932 aaKnown RBP4.84□□□□□ -1.63
VPS36YLR417W SPO7P18410 259 aa4.83□□□□□ -1.64
VPS36YLR417W CLN1P20437 546 aa4.83□□□□□ -1.64
VPS36YLR417W RPS2P25443 254 aaKnown RBP4.83□□□□□ -1.64
VPS36YLR417W MCM4P30665 933 aaKnown RBP4.83□□□□□ -1.64
VPS36YLR417W HIR2P32480 875 aa4.83□□□□□ -1.64
VPS36YLR417W ANP1P32629 500 aa4.83□□□□□ -1.64
VPS36YLR417W PEX2P32800 271 aa4.83□□□□□ -1.64
VPS36YLR417W PHD1P36093 366 aa4.83□□□□□ -1.64
VPS36YLR417W EFM4P40516 257 aa4.83□□□□□ -1.64
VPS36YLR417W RTS2P40962 232 aa4.83□□□□□ -1.64
VPS36YLR417W SMA1Q02651 245 aa4.83□□□□□ -1.64
VPS36YLR417W IZH1Q03419 316 aa4.83□□□□□ -1.64
VPS36YLR417W THI7Q05998 598 aa4.83□□□□□ -1.64
VPS36YLR417W CFT2Q12102 859 aaPredicted RBP4.83□□□□□ -1.64
VPS36YLR417W SKS1Q12505 502 aa4.83□□□□□ -1.64
VPS36YLR417W UFD4P33202 1483 aa4.83□□□□□ -1.64
VPS36YLR417W YPR089WO13585 888 aa4.83□□□□□ -1.64
VPS36YLR417W AIM17P23180 465 aaKnown RBP4.83□□□□□ -1.64
VPS36YLR417W KRE2P27809 442 aa4.83□□□□□ -1.64
VPS36YLR417W ATP11P32453 318 aa4.83□□□□□ -1.64
VPS36YLR417W UTR4P32626 227 aa4.83□□□□□ -1.64
VPS36YLR417W REC114P32841 428 aa4.83□□□□□ -1.64
VPS36YLR417W PDR3P33200 976 aa4.83□□□□□ -1.64
VPS36YLR417W EBP2P36049 427 aaKnown RBP4.83□□□□□ -1.64
VPS36YLR417W HEL1P36113 551 aa4.83□□□□□ -1.64
VPS36YLR417W POP1P41812 875 aa4.83□□□□□ -1.64
VPS36YLR417W TOM22P49334 152 aa4.83□□□□□ -1.64
VPS36YLR417W RPL15BP54780 204 aaPredicted RBP4.83□□□□□ -1.64
VPS36YLR417W RSF1Q05043 376 aa4.83□□□□□ -1.64
VPS36YLR417W GLO2Q05584 274 aa4.83□□□□□ -1.64
VPS36YLR417W DIC1Q06143 298 aa4.83□□□□□ -1.64
VPS36YLR417W AEP3Q12089 606 aa4.83□□□□□ -1.64
VPS36YLR417W RRD2Q12461 358 aa4.83□□□□□ -1.64
VPS36YLR417W RPL1AP0CX43 217 aaKnown RBP4.82□□□□□ -1.64
VPS36YLR417W RPL1BP0CX44 217 aaKnown RBP4.82□□□□□ -1.64
VPS36YLR417W BAR1P12630 587 aa4.82□□□□□ -1.64
VPS36YLR417W TPM1P17536 199 aaKnown RBP4.82□□□□□ -1.64
VPS36YLR417W FUN19P28003 413 aaPredicted RBP4.82□□□□□ -1.64
VPS36YLR417W SWH1P35845 1188 aa4.82□□□□□ -1.64
VPS36YLR417W MMS4P38257 691 aa4.82□□□□□ -1.64
VPS36YLR417W ERG7P38604 731 aa4.82□□□□□ -1.64
VPS36YLR417W PCL6P40038 420 aa4.82□□□□□ -1.64
VPS36YLR417W SER3P40054 469 aa4.82□□□□□ -1.64
VPS36YLR417W GAT1P43574 510 aa4.82□□□□□ -1.64
VPS36YLR417W YJL132WP47014 750 aa4.82□□□□□ -1.64
VPS36YLR417W LGE1Q02796 332 aaKnown RBP4.82□□□□□ -1.64
VPS36YLR417W SMF3Q12078 473 aaPredicted RBP4.82□□□□□ -1.64
VPS36YLR417W GEX1P25596 615 aa4.81□□□□□ -1.64
VPS36YLR417W RPN2P32565 945 aaKnown RBP4.81□□□□□ -1.64
VPS36YLR417W SPC34P36131 295 aa4.81□□□□□ -1.64
VPS36YLR417W CBP4P37267 147 aa4.81□□□□□ -1.64
VPS36YLR417W SYG1P40528 902 aa4.81□□□□□ -1.64
VPS36YLR417W FET5P43561 622 aa4.81□□□□□ -1.64
VPS36YLR417W RPS0BP46654 252 aaKnown RBP4.81□□□□□ -1.64
VPS36YLR417W ECM27P47144 725 aa4.81□□□□□ -1.64
VPS36YLR417W ATP22P50273 684 aaPredicted RBP4.81□□□□□ -1.64
VPS36YLR417W EOS1P53938 366 aa4.81□□□□□ -1.64
VPS36YLR417W DCS1Q06151 350 aa4.81□□□□□ -1.64
VPS36YLR417W RKM1Q08961 583 aaPredicted RBP4.81□□□□□ -1.64
VPS36YLR417W HER1Q12276 1246 aa4.81□□□□□ -1.64
VPS36YLR417W GLK1P17709 500 aaKnown RBP4.8□□□□□ -1.64
VPS36YLR417W YCR007CP25354 239 aa4.8□□□□□ -1.64
VPS36YLR417W SIN4P32259 974 aa4.8□□□□□ -1.64
VPS36YLR417W PRP21P32524 280 aaPredicted RBP4.8□□□□□ -1.64
VPS36YLR417W YMR124WP39523 943 aaKnown RBP4.8□□□□□ -1.64
VPS36YLR417W XBP1P40489 647 aa4.8□□□□□ -1.64
VPS36YLR417W NCS2P53923 493 aaPredicted RBP4.8□□□□□ -1.64
VPS36YLR417W MES1P00958 751 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms