RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	PFA3	P42836	336 aa		4.59	□□□□□ -1.67
APS1	YLR170C	MDM34	P53083	459 aa		4.59	□□□□□ -1.67
APS1	YLR170C	EFM5	P53200	248 aa	Known RBP	4.59	□□□□□ -1.67
APS1	YLR170C	GTR2	P53290	341 aa		4.59	□□□□□ -1.67
APS1	YLR170C	CTK1	Q03957	528 aa	Known RBP	4.59	□□□□□ -1.67
APS1	YLR170C	YMR111C	Q04461	462 aa	Predicted RBP	4.59	□□□□□ -1.67
APS1	YLR170C	THI73	Q07904	523 aa		4.59	□□□□□ -1.67
APS1	YLR170C	PFA4	Q12006	378 aa		4.59	□□□□□ -1.67
APS1	YLR170C	PIN2	Q12057	282 aa		4.59	□□□□□ -1.67
APS1	YLR170C	YPT6	Q99260	215 aa		4.59	□□□□□ -1.67
APS1	YLR170C	GUK1	P15454	187 aa	Known RBP	4.58	□□□□□ -1.68
APS1	YLR170C	PHO87	P25360	923 aa		4.58	□□□□□ -1.68
APS1	YLR170C	OCA4	P25366	362 aa		4.58	□□□□□ -1.68
APS1	YLR170C	ATP11	P32453	318 aa		4.58	□□□□□ -1.68
APS1	YLR170C	MGM101	P32787	269 aa	Known RBP	4.58	□□□□□ -1.68
APS1	YLR170C	CDC13	P32797	924 aa	Known RBP	4.58	□□□□□ -1.68
APS1	YLR170C	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
APS1	YLR170C	RIM11	P38615	370 aa		4.58	□□□□□ -1.68
APS1	YLR170C	MRX1	P40050	688 aa		4.58	□□□□□ -1.68
APS1	YLR170C	LSM5	P40089	93 aa	Known RBP	4.58	□□□□□ -1.68
APS1	YLR170C	UTP18	P40362	594 aa	Predicted RBP	4.58	□□□□□ -1.68
APS1	YLR170C	MET18	P40469	1032 aa		4.58	□□□□□ -1.68
APS1	YLR170C	PRM2	P40534	656 aa		4.58	□□□□□ -1.68
APS1	YLR170C	YJR030C	P47101	745 aa		4.58	□□□□□ -1.68
APS1	YLR170C	GCV1	P48015	400 aa		4.58	□□□□□ -1.68
APS1	YLR170C	PPT1	P53043	513 aa		4.58	□□□□□ -1.68
APS1	YLR170C	COS12	P53053	380 aa		4.58	□□□□□ -1.68
APS1	YLR170C	MPS1	P54199	764 aa		4.58	□□□□□ -1.68
APS1	YLR170C	AAT1	Q01802	451 aa		4.58	□□□□□ -1.68
APS1	YLR170C	MRS2	Q01926	470 aa		4.58	□□□□□ -1.68
APS1	YLR170C	TAF12	Q03761	539 aa		4.58	□□□□□ -1.68
APS1	YLR170C	GLO2	Q05584	274 aa		4.58	□□□□□ -1.68
APS1	YLR170C	RIF2	Q06208	395 aa		4.58	□□□□□ -1.68
APS1	YLR170C	CRN1	Q06440	651 aa		4.58	□□□□□ -1.68
APS1	YLR170C	RAD34	Q06665	692 aa		4.58	□□□□□ -1.68
APS1	YLR170C	CDA2	Q06703	312 aa		4.58	□□□□□ -1.68
APS1	YLR170C	RPN8	Q08723	338 aa	Known RBP	4.58	□□□□□ -1.68
APS1	YLR170C	ATG29	Q12092	213 aa		4.58	□□□□□ -1.68
APS1	YLR170C	ATG34	Q12292	412 aa		4.58	□□□□□ -1.68
APS1	YLR170C	BAS1	P22035	811 aa		4.57	□□□□□ -1.68
APS1	YLR170C	CLB1	P24868	471 aa		4.57	□□□□□ -1.68
APS1	YLR170C	SLM5	P25345	492 aa	Known RBP	4.57	□□□□□ -1.68
APS1	YLR170C	BUB2	P26448	306 aa	Predicted RBP	4.57	□□□□□ -1.68
APS1	YLR170C	PHO91	P27514	894 aa		4.57	□□□□□ -1.68
APS1	YLR170C	COX13	P32799	129 aa		4.57	□□□□□ -1.68
APS1	YLR170C	MRE11	P32829	692 aa		4.57	□□□□□ -1.68
APS1	YLR170C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
APS1	YLR170C	KKQ8	P36004	724 aa		4.57	□□□□□ -1.68
APS1	YLR170C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
APS1	YLR170C	TRM7	P38238	310 aa	Known RBP	4.57	□□□□□ -1.68
APS1	YLR170C	BZZ1	P38822	633 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YHR219W	P38900	624 aa		4.57	□□□□□ -1.68
APS1	YLR170C	SEC31	P38968	1273 aa	Known RBP	4.57	□□□□□ -1.68
APS1	YLR170C	MGS1	P40151	587 aa		4.57	□□□□□ -1.68
APS1	YLR170C	IAH1	P41734	238 aa		4.57	□□□□□ -1.68
APS1	YLR170C	SEC27	P41811	889 aa	Known RBP	4.57	□□□□□ -1.68
APS1	YLR170C	FKH2	P41813	862 aa		4.57	□□□□□ -1.68
APS1	YLR170C	ZIM17	P42844	174 aa		4.57	□□□□□ -1.68
APS1	YLR170C	FET5	P43561	622 aa		4.57	□□□□□ -1.68
APS1	YLR170C	MET12	P46151	657 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YGL176C	P46945	554 aa		4.57	□□□□□ -1.68
APS1	YLR170C	CIS3	P47001	227 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YJR154W	P47181	346 aa		4.57	□□□□□ -1.68
APS1	YLR170C	HXT16	P47185	567 aa		4.57	□□□□□ -1.68
APS1	YLR170C	NOP19	P53317	196 aa	Predicted RBP	4.57	□□□□□ -1.68
APS1	YLR170C	HXT15	P54854	567 aa		4.57	□□□□□ -1.68
APS1	YLR170C	EGD1	Q02642	157 aa	Known RBP	4.57	□□□□□ -1.68
APS1	YLR170C	GIP3	Q03016	1276 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YML096W	Q04489	525 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YDR124W	Q04608	324 aa		4.57	□□□□□ -1.68
APS1	YLR170C	PSR1	Q07800	427 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YDR056C	Q12025	205 aa		4.57	□□□□□ -1.68
APS1	YLR170C	YLR049C	Q12110	428 aa		4.57	□□□□□ -1.68
APS1	YLR170C	MHT1	Q12525	324 aa		4.57	□□□□□ -1.68
APS1	YLR170C	FMP27	Q06179	2628 aa		4.56	□□□□□ -1.68
APS1	YLR170C	CAR1	P00812	333 aa	Known RBP	4.56	□□□□□ -1.68
APS1	YLR170C	HXT4	P32467	576 aa		4.56	□□□□□ -1.68
APS1	YLR170C	STE14	P32584	239 aa		4.56	□□□□□ -1.68
APS1	YLR170C	PEP12	P32854	288 aa		4.56	□□□□□ -1.68
APS1	YLR170C	CAF4	P36130	643 aa		4.56	□□□□□ -1.68
APS1	YLR170C	TSC10	P38342	320 aa		4.56	□□□□□ -1.68
APS1	YLR170C	YHR033W	P38690	423 aa		4.56	□□□□□ -1.68
APS1	YLR170C	INM1	P38710	295 aa		4.56	□□□□□ -1.68
APS1	YLR170C	HXT6	P39003	570 aa	Known RBP	4.56	□□□□□ -1.68
APS1	YLR170C	HXT7	P39004	570 aa		4.56	□□□□□ -1.68
APS1	YLR170C	YEN1	P40028	759 aa		4.56	□□□□□ -1.68
APS1	YLR170C	LRO1	P40345	661 aa		4.56	□□□□□ -1.68
APS1	YLR170C	YPS6	P40583	537 aa		4.56	□□□□□ -1.68
APS1	YLR170C	PSA1	P41940	361 aa	Known RBP	4.56	□□□□□ -1.68
APS1	YLR170C	MRM2	P53123	320 aa		4.56	□□□□□ -1.68
APS1	YLR170C	CUS2	P53830	285 aa	Predicted RBP	4.56	□□□□□ -1.68
APS1	YLR170C	ECM11	Q04110	302 aa		4.56	□□□□□ -1.68
APS1	YLR170C	MUS81	Q04149	632 aa	Predicted RBP	4.56	□□□□□ -1.68
APS1	YLR170C	RRN11	Q04712	507 aa		4.56	□□□□□ -1.68
APS1	YLR170C	CDA1	Q06702	301 aa		4.56	□□□□□ -1.68
APS1	YLR170C	YEH2	Q07950	538 aa		4.56	□□□□□ -1.68
APS1	YLR170C	MCH5	Q08777	521 aa		4.56	□□□□□ -1.68
APS1	YLR170C	YIG1	Q08956	461 aa		4.56	□□□□□ -1.68
APS1	YLR170C	DIN7	Q12086	430 aa		4.56	□□□□□ -1.68
APS1	YLR170C	RTK1	Q12100	620 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms