RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C USA1Q03714 838 aa3.98□□□□□ -1.77
SRP40YKR092C GYL1Q04322 720 aa3.98□□□□□ -1.77
SRP40YKR092C GIM5Q04493 163 aa3.98□□□□□ -1.77
SRP40YKR092C ECM7Q06200 448 aa3.98□□□□□ -1.77
SRP40YKR092C YDL114WQ07530 308 aa3.98□□□□□ -1.77
SRP40YKR092C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SRP40YKR092C FMP40Q08968 688 aaPredicted RBP3.98□□□□□ -1.77
SRP40YKR092C IES3Q12345 250 aa3.98□□□□□ -1.77
SRP40YKR092C NCB2Q92317 146 aa3.98□□□□□ -1.77
SRP40YKR092C YOS9Q99220 542 aa3.98□□□□□ -1.77
SRP40YKR092C PDR18P53756 1333 aa3.97□□□□□ -1.77
SRP40YKR092C TDH1P00360 332 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C MSS18P08593 268 aa3.97□□□□□ -1.77
SRP40YKR092C DSF1P0CX08 502 aa3.97□□□□□ -1.77
SRP40YKR092C YNR073CP0CX09 502 aa3.97□□□□□ -1.77
SRP40YKR092C PET122P10355 254 aa3.97□□□□□ -1.77
SRP40YKR092C YAK1P14680 807 aa3.97□□□□□ -1.77
SRP40YKR092C MET8P15807 274 aa3.97□□□□□ -1.77
SRP40YKR092C UTR1P21373 530 aa3.97□□□□□ -1.77
SRP40YKR092C OSM1P21375 501 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C VPS34P22543 875 aa3.97□□□□□ -1.77
SRP40YKR092C SAT4P25333 603 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C RPS7AP26786 190 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C AAP1P37898 856 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C PCH2P38126 564 aa3.97□□□□□ -1.77
SRP40YKR092C RFC3P38629 340 aa3.97□□□□□ -1.77
SRP40YKR092C FLC2P39719 783 aa3.97□□□□□ -1.77
SRP40YKR092C SCC4P40090 624 aa3.97□□□□□ -1.77
SRP40YKR092C ATF1P40353 525 aa3.97□□□□□ -1.77
SRP40YKR092C IDS2P46958 469 aa3.97□□□□□ -1.77
SRP40YKR092C LSM1P47017 172 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C HAM1P47119 197 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C YGL117WP53133 265 aa3.97□□□□□ -1.77
SRP40YKR092C COG2P53271 262 aa3.97□□□□□ -1.77
SRP40YKR092C CPR8P53728 308 aa3.97□□□□□ -1.77
SRP40YKR092C PRO2P54885 456 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C BET4Q00618 327 aa3.97□□□□□ -1.77
SRP40YKR092C YMR102CQ03177 834 aa3.97□□□□□ -1.77
SRP40YKR092C MMR1Q06324 491 aa3.97□□□□□ -1.77
SRP40YKR092C CRD1Q07560 283 aa3.97□□□□□ -1.77
SRP40YKR092C AAD4Q07747 329 aa3.97□□□□□ -1.77
SRP40YKR092C SIL1Q08199 421 aa3.97□□□□□ -1.77
SRP40YKR092C RRT8Q08219 342 aa3.97□□□□□ -1.77
SRP40YKR092C RIM20Q12033 661 aa3.97□□□□□ -1.77
SRP40YKR092C VPS54Q12071 889 aa3.97□□□□□ -1.77
SRP40YKR092C ISA2Q12425 185 aa3.97□□□□□ -1.77
SRP40YKR092C DDP1Q99321 188 aaKnown RBP3.97□□□□□ -1.77
SRP40YKR092C SEM1O94742 89 aa3.96□□□□□ -1.78
SRP40YKR092C PGK1P00560 416 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C CBP2P03874 630 aaPredicted RBP3.96□□□□□ -1.78
SRP40YKR092C RSR1P13856 272 aa3.96□□□□□ -1.78
SRP40YKR092C TAL1P15019 335 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C FRS2P15625 503 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C PRP16P15938 1071 aaPredicted RBP3.96□□□□□ -1.78
SRP40YKR092C PFK2P16862 959 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SRP40YKR092C DAP2P18962 818 aa3.96□□□□□ -1.78
SRP40YKR092C PRE8P23639 250 aa3.96□□□□□ -1.78
SRP40YKR092C MNE1P24720 663 aa3.96□□□□□ -1.78
SRP40YKR092C ADY2P25613 283 aa3.96□□□□□ -1.78
SRP40YKR092C PAH1P32567 862 aa3.96□□□□□ -1.78
SRP40YKR092C UGP1P32861 499 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C SUR1P33300 382 aa3.96□□□□□ -1.78
SRP40YKR092C LAS1P36146 502 aaPredicted RBP3.96□□□□□ -1.78
SRP40YKR092C YPT10P38146 199 aa3.96□□□□□ -1.78
SRP40YKR092C MMS4P38257 691 aa3.96□□□□□ -1.78
SRP40YKR092C FZO1P38297 855 aa3.96□□□□□ -1.78
SRP40YKR092C SWC5P38326 303 aa3.96□□□□□ -1.78
SRP40YKR092C YDR089WP38966 869 aa3.96□□□□□ -1.78
SRP40YKR092C PRM9P39551 298 aa3.96□□□□□ -1.78
SRP40YKR092C PAC2P39937 518 aa3.96□□□□□ -1.78
SRP40YKR092C EDC3P39998 551 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C LSM5P40089 93 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C SHQ1P40486 507 aaPredicted RBP3.96□□□□□ -1.78
SRP40YKR092C PIB2P53191 635 aa3.96□□□□□ -1.78
SRP40YKR092C YGR111WP53265 400 aa3.96□□□□□ -1.78
SRP40YKR092C SSU72P53538 206 aaPredicted RBP3.96□□□□□ -1.78
SRP40YKR092C MOT3P54785 490 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C LGE1Q02796 332 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C FCP1Q03254 732 aa3.96□□□□□ -1.78
SRP40YKR092C TRS31Q03337 283 aa3.96□□□□□ -1.78
SRP40YKR092C ARA2Q04212 335 aa3.96□□□□□ -1.78
SRP40YKR092C VPS38Q05919 439 aa3.96□□□□□ -1.78
SRP40YKR092C VPS74Q06385 345 aa3.96□□□□□ -1.78
SRP40YKR092C HER1Q12276 1246 aa3.96□□□□□ -1.78
SRP40YKR092C AVL9Q12500 764 aa3.96□□□□□ -1.78
SRP40YKR092C PAR32Q12515 295 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C HTZ1Q12692 134 aaKnown RBP3.96□□□□□ -1.78
SRP40YKR092C RAD7P06779 565 aa3.95□□□□□ -1.78
SRP40YKR092C ADE5,7P07244 802 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C CAR2P07991 424 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C GPA1P08539 472 aa3.95□□□□□ -1.78
SRP40YKR092C YPK1P12688 680 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C KGD2P19262 463 aaPredicted RBP3.95□□□□□ -1.78
SRP40YKR092C SAN1P22470 610 aa3.95□□□□□ -1.78
SRP40YKR092C MBR1P23493 339 aa3.95□□□□□ -1.78
SRP40YKR092C ILV6P25605 309 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C POT1P27796 417 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SRP40YKR092C RPC19P28000 142 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C PRP45P28004 379 aaPredicted RBP3.95□□□□□ -1.78
SRP40YKR092C PRE2P30656 287 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms