RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C WSC2P53832 503 aa3.21□□□□□ -1.9
YPT52YKR014C VPS72Q03388 795 aa3.21□□□□□ -1.9
YPT52YKR014C SMA2Q04658 369 aa3.21□□□□□ -1.9
YPT52YKR014C HEL2Q05580 639 aaKnown RBP3.21□□□□□ -1.9
YPT52YKR014C CFT2Q12102 859 aaPredicted RBP3.21□□□□□ -1.9
YPT52YKR014C CTF3Q12748 733 aa3.21□□□□□ -1.9
YPT52YKR014C RAV1P47104 1357 aa3.21□□□□□ -1.9
YPT52YKR014C COR1P07256 457 aa3.2□□□□□ -1.9
YPT52YKR014C PMR1P13586 950 aa3.2□□□□□ -1.9
YPT52YKR014C CPR1P14832 162 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C OLE1P21147 510 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C PRD1P25375 712 aa3.2□□□□□ -1.9
YPT52YKR014C FUN19P28003 413 aaPredicted RBP3.2□□□□□ -1.9
YPT52YKR014C CRM1P30822 1084 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C MFT1P33441 392 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C MKT1P40850 830 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C YFL067WP43537 175 aa3.2□□□□□ -1.9
YPT52YKR014C AIM22P47051 409 aa3.2□□□□□ -1.9
YPT52YKR014C UPF3P48412 387 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C CAF40P53829 373 aa3.2□□□□□ -1.9
YPT52YKR014C RPT6Q01939 405 aaKnown RBP3.2□□□□□ -1.9
YPT52YKR014C YDL121CQ07541 149 aa3.2□□□□□ -1.9
YPT52YKR014C MES1P00958 751 aaKnown RBP3.19□□□□□ -1.9
YPT52YKR014C REV1P12689 985 aa3.19□□□□□ -1.9
YPT52YKR014C OCA4P25366 362 aa3.19□□□□□ -1.9
YPT52YKR014C MRP4P32902 394 aa3.19□□□□□ -1.9
YPT52YKR014C WBP1P33767 430 aaKnown RBP3.19□□□□□ -1.9
YPT52YKR014C FRE2P36033 711 aa3.19□□□□□ -1.9
YPT52YKR014C NAB3P38996 802 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
YPT52YKR014C DOT5P40553 215 aa3.19□□□□□ -1.9
YPT52YKR014C SGN1P40561 250 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
YPT52YKR014C SPG5P42933 373 aa3.19□□□□□ -1.9
YPT52YKR014C CAF130P53280 1122 aaPredicted RBP3.19□□□□□ -1.9
YPT52YKR014C VPS75P53853 264 aa3.19□□□□□ -1.9
YPT52YKR014C YDR239CQ03780 787 aa3.19□□□□□ -1.9
YPT52YKR014C RRN11Q04712 507 aa3.19□□□□□ -1.9
YPT52YKR014C SEC39Q12745 709 aa3.19□□□□□ -1.9
YPT52YKR014C YCL021W-AQ96VH3 125 aa3.19□□□□□ -1.9
YPT52YKR014C MRE11P32829 692 aa3.18□□□□□ -1.9
YPT52YKR014C PAD1P33751 242 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
YPT52YKR014C SWH1P35845 1188 aa3.18□□□□□ -1.9
YPT52YKR014C CST26P38226 397 aa3.18□□□□□ -1.9
YPT52YKR014C MUM2P38236 366 aa3.18□□□□□ -1.9
YPT52YKR014C OGG1P53397 376 aaPredicted RBP3.18□□□□□ -1.9
YPT52YKR014C PIR3Q03180 325 aa3.18□□□□□ -1.9
YPT52YKR014C LEU4P06208 619 aaKnown RBP3.17□□□□□ -1.9
YPT52YKR014C RPL31BP0C2H9 113 aaKnown RBP3.17□□□□□ -1.9
YPT52YKR014C ELO2P25358 347 aa3.17□□□□□ -1.9
YPT52YKR014C BUB3P26449 341 aa3.17□□□□□ -1.9
YPT52YKR014C DEG1P31115 442 aaKnown RBP3.17□□□□□ -1.9
YPT52YKR014C NDI1P32340 513 aa3.17□□□□□ -1.9
YPT52YKR014C PET130P47065 347 aa3.17□□□□□ -1.9
YPT52YKR014C SHE10P53075 577 aa3.17□□□□□ -1.9
YPT52YKR014C PDS5Q04264 1277 aa3.17□□□□□ -1.9
YPT52YKR014C KEL3Q08979 651 aaPredicted RBP3.17□□□□□ -1.9
YPT52YKR014C YDL007C-AQ2V2Q0 85 aa3.17□□□□□ -1.9
YPT52YKR014C YBL059WP34224 193 aa3.16□□□□□ -1.9
YPT52YKR014C SRO77P38163 1010 aa3.16□□□□□ -1.9
YPT52YKR014C FAU1P40099 211 aa3.16□□□□□ -1.9
YPT52YKR014C MET28P40573 187 aa3.16□□□□□ -1.9
YPT52YKR014C OCA1P50946 238 aaPredicted RBP3.16□□□□□ -1.9
YPT52YKR014C TWF1P53250 332 aa3.16□□□□□ -1.9
YPT52YKR014C HHF1P02309 103 aaKnown RBP3.15□□□□□ -1.91
YPT52YKR014C HIP1P06775 603 aa3.15□□□□□ -1.91
YPT52YKR014C YAR066WP0CX18 203 aa3.15□□□□□ -1.91
YPT52YKR014C YHR214WP0CX19 203 aa3.15□□□□□ -1.91
YPT52YKR014C SPT15P13393 240 aaKnown RBP3.15□□□□□ -1.91
YPT52YKR014C IMP2'P32351 346 aa3.15□□□□□ -1.91
YPT52YKR014C REC114P32841 428 aa3.15□□□□□ -1.91
YPT52YKR014C YBR225WP38321 900 aa3.15□□□□□ -1.91
YPT52YKR014C NDT80P38830 627 aa3.15□□□□□ -1.91
YPT52YKR014C ISC1P40015 477 aaKnown RBP3.15□□□□□ -1.91
YPT52YKR014C ARF3P40994 183 aaRIP-Chip data3.15□□□□□ -1.91not detected
YPT52YKR014C BTN2P53286 410 aa3.15□□□□□ -1.91
YPT52YKR014C SVL3Q03088 825 aaKnown RBP3.15□□□□□ -1.91
YPT52YKR014C RPC11Q04307 110 aaPredicted RBP3.15□□□□□ -1.91
YPT52YKR014C SOV1Q04748 898 aa3.15□□□□□ -1.91
YPT52YKR014C PAL1Q05518 499 aaKnown RBP3.15□□□□□ -1.91
YPT52YKR014C RRP12Q12754 1228 aaKnown RBP3.15□□□□□ -1.91
YPT52YKR014C YML133CQ03099 1374 aa3.14□□□□□ -1.91
YPT52YKR014C YLL067CQ07888 1374 aa3.14□□□□□ -1.91
YPT52YKR014C YLL066CQ99208 1374 aa3.14□□□□□ -1.91
YPT52YKR014C SUP35P05453 685 aaKnown RBP3.14□□□□□ -1.91
YPT52YKR014C HEM15P16622 393 aa3.14□□□□□ -1.91
YPT52YKR014C ATP11P32453 318 aa3.14□□□□□ -1.91
YPT52YKR014C GLC7P32598 312 aaKnown RBP3.14□□□□□ -1.91
YPT52YKR014C NAT2P37293 288 aa3.14□□□□□ -1.91
YPT52YKR014C AVT4P50944 713 aa3.14□□□□□ -1.91
YPT52YKR014C IBD2P53892 351 aa3.14□□□□□ -1.91
YPT52YKR014C PNG1Q02890 363 aa3.14□□□□□ -1.91
YPT52YKR014C MUM3Q08750 479 aa3.14□□□□□ -1.91
YPT52YKR014C RKM5Q12367 367 aa3.14□□□□□ -1.91
YPT52YKR014C YER078W-AQ3E7A2 54 aa3.14□□□□□ -1.91
YPT52YKR014C RHO2P06781 192 aa3.13□□□□□ -1.91
YPT52YKR014C YCR100CP25606 316 aa3.13□□□□□ -1.91
YPT52YKR014C RAD14P28519 371 aa3.13□□□□□ -1.91
YPT52YKR014C GYP6P32806 458 aa3.13□□□□□ -1.91
YPT52YKR014C CMC1P36064 111 aa3.13□□□□□ -1.91
YPT52YKR014C VID24P38263 362 aa3.13□□□□□ -1.91
YPT52YKR014C SYG1P40528 902 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms