RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W CUZ1P53899 274 aa3.7□□□□□ -1.82
NUP85YJR042W ERV41Q04651 352 aa3.7□□□□□ -1.82
NUP85YJR042W RTN1Q04947 295 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W NDL1Q06568 189 aa3.7□□□□□ -1.82
NUP85YJR042W YOR352WQ08816 343 aa3.7□□□□□ -1.82
NUP85YJR042W SLP1Q12232 587 aa3.7□□□□□ -1.82
NUP85YJR042W DFG16Q99234 619 aa3.7□□□□□ -1.82
NUP85YJR042W RPP1AP05318 106 aaPredicted RBP3.69□□□□□ -1.82
NUP85YJR042W MATALPHA2P0CY08 210 aa3.69□□□□□ -1.82
NUP85YJR042W HMLALPHA2P0CY09 210 aa3.69□□□□□ -1.82
NUP85YJR042W SRP54P20424 541 aaKnown RBP3.69□□□□□ -1.82
NUP85YJR042W GBP2P25555 427 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
NUP85YJR042W NDI1P32340 513 aa3.69□□□□□ -1.82
NUP85YJR042W UGP1P32861 499 aaKnown RBP3.69□□□□□ -1.82
NUP85YJR042W CUE2P36075 443 aaKnown RBP3.69□□□□□ -1.82
NUP85YJR042W YKR015CP36111 568 aa3.69□□□□□ -1.82
NUP85YJR042W TAE1P38340 232 aa3.69□□□□□ -1.82
NUP85YJR042W SBE22P38814 852 aa3.69□□□□□ -1.82
NUP85YJR042W YMR147WP40218 223 aaKnown RBP3.69□□□□□ -1.82
NUP85YJR042W SHQ1P40486 507 aaPredicted RBP3.69□□□□□ -1.82
NUP85YJR042W FKH2P41813 862 aa3.69□□□□□ -1.82
NUP85YJR042W STB2P46679 850 aa3.69□□□□□ -1.82
NUP85YJR042W GTO1P48239 356 aa3.69□□□□□ -1.82
NUP85YJR042W RMD9P53140 646 aaKnown RBP3.69□□□□□ -1.82
NUP85YJR042W YPL108WQ02872 168 aaPredicted RBP3.69□□□□□ -1.82
NUP85YJR042W SRL4Q03085 281 aa3.69□□□□□ -1.82
NUP85YJR042W MTG1Q03151 367 aaPredicted RBP3.69□□□□□ -1.82
NUP85YJR042W SIZ1Q04195 904 aa3.69□□□□□ -1.82
NUP85YJR042W SSQ1Q05931 657 aaPredicted RBP3.69□□□□□ -1.82
NUP85YJR042W MCM21Q06675 368 aa3.69□□□□□ -1.82
NUP85YJR042W CRT10Q08226 957 aa3.69□□□□□ -1.82
NUP85YJR042W POM34Q12445 299 aa3.69□□□□□ -1.82
NUP85YJR042W NBL1Q3E7Y6 73 aa3.69□□□□□ -1.82
NUP85YJR042W SSK22P25390 1331 aaPredicted RBP3.69□□□□□ -1.82
NUP85YJR042W ILV5P06168 395 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W GAL3P13045 520 aa3.68□□□□□ -1.82
NUP85YJR042W PDA1P16387 420 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W UGA1P17649 471 aa3.68□□□□□ -1.82
NUP85YJR042W CLN1P20437 546 aa3.68□□□□□ -1.82
NUP85YJR042W STE11P23561 717 aa3.68□□□□□ -1.82
NUP85YJR042W MAE1P36013 669 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W PCA1P38360 1216 aa3.68□□□□□ -1.82
NUP85YJR042W YJL206CP39529 758 aa3.68□□□□□ -1.82
NUP85YJR042W YER085CP40058 173 aa3.68□□□□□ -1.82
NUP85YJR042W VHS2P40463 436 aa3.68□□□□□ -1.82
NUP85YJR042W MND2P40577 368 aa3.68□□□□□ -1.82
NUP85YJR042W YPT11P48559 417 aa3.68□□□□□ -1.82
NUP85YJR042W EFM5P53200 248 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W FHN1P53279 174 aa3.68□□□□□ -1.82
NUP85YJR042W MSC1Q03104 513 aa3.68□□□□□ -1.82
NUP85YJR042W ARG7Q04728 441 aa3.68□□□□□ -1.82
NUP85YJR042W COQ9Q05779 260 aa3.68□□□□□ -1.82
NUP85YJR042W VAC14Q06708 880 aa3.68□□□□□ -1.82
NUP85YJR042W SGO1Q08490 590 aa3.68□□□□□ -1.82
NUP85YJR042W LYS21Q12122 440 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W ATG9Q12142 997 aa3.68□□□□□ -1.82
NUP85YJR042W ZPS1Q12512 249 aa3.68□□□□□ -1.82
NUP85YJR042W Q0010Q9ZZX9 128 aa3.68□□□□□ -1.82
NUP85YJR042W CDC37P06101 506 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W LEU4P06208 619 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W RSR1P13856 272 aa3.68□□□□□ -1.82
NUP85YJR042W SUA5P32579 426 aa3.68□□□□□ -1.82
NUP85YJR042W IMP3P32899 183 aaPredicted RBP3.68□□□□□ -1.82
NUP85YJR042W PZF1P39933 429 aa3.68□□□□□ -1.82
NUP85YJR042W TFG2P41896 400 aaPredicted RBP3.68□□□□□ -1.82
NUP85YJR042W OTU1P43558 301 aa3.68□□□□□ -1.82
NUP85YJR042W RPS7BP48164 190 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W YIP5P53108 310 aa3.68□□□□□ -1.82
NUP85YJR042W COP1P53622 1201 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W RTC4P53850 401 aa3.68□□□□□ -1.82
NUP85YJR042W ADE12P80210 433 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W FIN1Q03898 291 aa3.68□□□□□ -1.82
NUP85YJR042W AFT2Q08957 416 aa3.68□□□□□ -1.82
NUP85YJR042W YDR061WQ12298 539 aa3.68□□□□□ -1.82
NUP85YJR042W YVC1Q12324 675 aa3.68□□□□□ -1.82
NUP85YJR042W ERG27Q12452 347 aaKnown RBP3.68□□□□□ -1.82
NUP85YJR042W YDL007C-AQ2V2Q0 85 aa3.68□□□□□ -1.82
NUP85YJR042W YBR085C-AO43137 85 aa3.67□□□□□ -1.82
NUP85YJR042W ILV2P07342 687 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W ERG20P08524 352 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W GPA1P08539 472 aa3.67□□□□□ -1.82
NUP85YJR042W SSA3P09435 649 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W RPS4AP0CX35 261 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W RPS4BP0CX36 261 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W ABF1P14164 731 aa3.67□□□□□ -1.82
NUP85YJR042W SAC7P17121 654 aa3.67□□□□□ -1.82
NUP85YJR042W URA4P20051 364 aa3.67□□□□□ -1.82
NUP85YJR042W FPS1P23900 669 aa3.67□□□□□ -1.82
NUP85YJR042W PET18P25362 215 aa3.67□□□□□ -1.82
NUP85YJR042W HXT1P32465 570 aa3.67□□□□□ -1.82
NUP85YJR042W CBF5P33322 483 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
NUP85YJR042W HCS1P34243 683 aa3.67□□□□□ -1.82
NUP85YJR042W ADE17P38009 592 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W RPA34P47006 233 aaPredicted RBP3.67□□□□□ -1.82
NUP85YJR042W TEX1P53851 422 aaKnown RBP3.67□□□□□ -1.82
NUP85YJR042W PGA2P53903 129 aa3.67□□□□□ -1.82
NUP85YJR042W OCA2P53949 197 aa3.67□□□□□ -1.82
NUP85YJR042W EFM6P53970 246 aa3.67□□□□□ -1.82
NUP85YJR042W REC102Q02721 264 aa3.67□□□□□ -1.82
NUP85YJR042W MDM30Q05930 598 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms