RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C TCM62P38228 572 aaKnown RBP3.4□□□□□ -1.87
CTK2YJL006C MTC6P38849 526 aa3.4□□□□□ -1.87
CTK2YJL006C TIF4631P39935 952 aaKnown RBP3.4□□□□□ -1.87
CTK2YJL006C ESL1P40456 1118 aa3.4□□□□□ -1.87
CTK2YJL006C DOT5P40553 215 aa3.4□□□□□ -1.87
CTK2YJL006C ARF3P40994 183 aaRIP-Chip data3.4□□□□□ -1.87not detected
CTK2YJL006C AIM22P47051 409 aa3.4□□□□□ -1.87
CTK2YJL006C PET130P47065 347 aa3.4□□□□□ -1.87
CTK2YJL006C SLD5Q03406 294 aa3.4□□□□□ -1.87
CTK2YJL006C YDR239CQ03780 787 aa3.4□□□□□ -1.87
CTK2YJL006C BNA5Q05979 453 aa3.4□□□□□ -1.87
CTK2YJL006C TSR2Q06672 205 aaKnown RBP3.4□□□□□ -1.87
CTK2YJL006C SYO1Q07395 620 aa3.4□□□□□ -1.87
CTK2YJL006C RTP1Q12751 981 aa3.4□□□□□ -1.87
CTK2YJL006C YCR007CP25354 239 aa3.39□□□□□ -1.87
CTK2YJL006C UTR4P32626 227 aa3.39□□□□□ -1.87
CTK2YJL006C MSN2P33748 704 aa3.39□□□□□ -1.87
CTK2YJL006C NDE1P40215 560 aa3.39□□□□□ -1.87
CTK2YJL006C IDP2P41939 412 aa3.39□□□□□ -1.87
CTK2YJL006C IRC6P43615 237 aa3.39□□□□□ -1.87
CTK2YJL006C HEF3P53978 1044 aaKnown RBP3.39□□□□□ -1.87
CTK2YJL006C AYT1Q12226 474 aa3.39□□□□□ -1.87
CTK2YJL006C SEC39Q12745 709 aa3.39□□□□□ -1.87
CTK2YJL006C AMD1P15274 810 aaKnown RBP3.38□□□□□ -1.87
CTK2YJL006C YEL045CP32616 141 aa3.38□□□□□ -1.87
CTK2YJL006C CST26P38226 397 aa3.38□□□□□ -1.87
CTK2YJL006C VID24P38263 362 aa3.38□□□□□ -1.87
CTK2YJL006C MTC4P38335 694 aaKnown RBP3.38□□□□□ -1.87
CTK2YJL006C MBB1P39534 108 aa3.38□□□□□ -1.87
CTK2YJL006C VPS52P39904 641 aa3.38□□□□□ -1.87
CTK2YJL006C MET18P40469 1032 aa3.38□□□□□ -1.87
CTK2YJL006C SCD6P45978 349 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
CTK2YJL006C TWF1P53250 332 aa3.38□□□□□ -1.87
CTK2YJL006C ZPR1P53303 486 aaKnown RBP3.38□□□□□ -1.87
CTK2YJL006C YDL009CQ12210 107 aa3.38□□□□□ -1.87
CTK2YJL006C YDL007C-AQ2V2Q0 85 aa3.38□□□□□ -1.87
CTK2YJL006C BRR1Q99177 341 aaPredicted RBP3.38□□□□□ -1.87
CTK2YJL006C COR1P07256 457 aa3.37□□□□□ -1.87
CTK2YJL006C CKA1P15790 372 aa3.37□□□□□ -1.87
CTK2YJL006C PTH1P38876 190 aaKnown RBP3.37□□□□□ -1.87
CTK2YJL006C UTP9P38882 575 aaKnown RBP3.37□□□□□ -1.87
CTK2YJL006C ERP2P39704 215 aa3.37□□□□□ -1.87
CTK2YJL006C JJJ1P53863 590 aa3.37□□□□□ -1.87
CTK2YJL006C MRPL19P53875 158 aa3.37□□□□□ -1.87
CTK2YJL006C RLI1Q03195 608 aaKnown RBP3.37□□□□□ -1.87
CTK2YJL006C IVY1Q04934 453 aa3.37□□□□□ -1.87
CTK2YJL006C MRPL51Q06090 140 aaPredicted RBP3.37□□□□□ -1.87
CTK2YJL006C MRD1Q06106 887 aaKnown RBP3.37□□□□□ -1.87
CTK2YJL006C PHO92Q06390 306 aa3.37□□□□□ -1.87
CTK2YJL006C LSP1Q12230 341 aaKnown RBP3.37□□□□□ -1.87
CTK2YJL006C CAR1P00812 333 aaKnown RBP3.36□□□□□ -1.87
CTK2YJL006C RPL31BP0C2H9 113 aaKnown RBP3.36□□□□□ -1.87
CTK2YJL006C HXT1P32465 570 aa3.36□□□□□ -1.87
CTK2YJL006C FRE1P32791 686 aa3.36□□□□□ -1.87
CTK2YJL006C CMC1P36064 111 aa3.36□□□□□ -1.87
CTK2YJL006C CAF130P53280 1122 aaPredicted RBP3.36□□□□□ -1.87
CTK2YJL006C GPI1P53306 609 aa3.36□□□□□ -1.87
CTK2YJL006C APJ1P53940 528 aa3.36□□□□□ -1.87
CTK2YJL006C SLG1P54867 378 aa3.36□□□□□ -1.87
CTK2YJL006C RIM20Q12033 661 aa3.36□□□□□ -1.87
CTK2YJL006C ATG29Q12092 213 aa3.36□□□□□ -1.87
CTK2YJL006C HEM2P05373 342 aa3.35□□□□□ -1.87
CTK2YJL006C MET17P06106 444 aa3.35□□□□□ -1.87
CTK2YJL006C CDC31P06704 161 aaKnown RBP3.35□□□□□ -1.87
CTK2YJL006C RPL20AP0CX23 172 aaKnown RBP3.35□□□□□ -1.87
CTK2YJL006C RPL20BP0CX24 172 aaPredicted RBP3.35□□□□□ -1.87
CTK2YJL006C GLK1P17709 500 aaKnown RBP3.35□□□□□ -1.87
CTK2YJL006C EXO70P19658 623 aa3.35□□□□□ -1.87
CTK2YJL006C YCR022CP25620 114 aa3.35□□□□□ -1.87
CTK2YJL006C GPI10P30777 616 aa3.35□□□□□ -1.87
CTK2YJL006C SEC66P33754 206 aa3.35□□□□□ -1.87
CTK2YJL006C PMT1P33775 817 aa3.35□□□□□ -1.87
CTK2YJL006C IRC15Q02733 499 aa3.35□□□□□ -1.87
CTK2YJL006C PDS5Q04264 1277 aa3.35□□□□□ -1.87
CTK2YJL006C PAL1Q05518 499 aaKnown RBP3.35□□□□□ -1.87
CTK2YJL006C RBS1Q05672 457 aaKnown RBP3.35□□□□□ -1.87
CTK2YJL006C VPS74Q06385 345 aa3.35□□□□□ -1.87
CTK2YJL006C GRX6Q12438 231 aa3.35□□□□□ -1.87
CTK2YJL006C INH1P01097 85 aa3.34□□□□□ -1.87
CTK2YJL006C SMF1P38925 575 aa3.34□□□□□ -1.87
CTK2YJL006C HXT14P42833 540 aa3.34□□□□□ -1.87
CTK2YJL006C MDM1Q01846 1127 aa3.34□□□□□ -1.87
CTK2YJL006C TAP42Q04372 366 aa3.34□□□□□ -1.87
CTK2YJL006C RQC1Q05468 723 aaKnown RBP3.34□□□□□ -1.87
CTK2YJL006C KEL3Q08979 651 aaPredicted RBP3.34□□□□□ -1.87
CTK2YJL006C CFT2Q12102 859 aaPredicted RBP3.34□□□□□ -1.87
CTK2YJL006C YCL021W-AQ96VH3 125 aa3.34□□□□□ -1.87
CTK2YJL006C RAV1P47104 1357 aa3.34□□□□□ -1.88
CTK2YJL006C ROX1P25042 368 aa3.33□□□□□ -1.88
CTK2YJL006C ATP11P32453 318 aa3.33□□□□□ -1.88
CTK2YJL006C KEL1P38853 1164 aaKnown RBP3.33□□□□□ -1.88
CTK2YJL006C SHO1P40073 367 aa3.33□□□□□ -1.88
CTK2YJL006C YMR147WP40218 223 aaKnown RBP3.33□□□□□ -1.88
CTK2YJL006C URB2P47108 1174 aa3.33□□□□□ -1.88
CTK2YJL006C TAF11Q04226 346 aa3.33□□□□□ -1.88
CTK2YJL006C HEL2Q05580 639 aaKnown RBP3.33□□□□□ -1.88
CTK2YJL006C MES1P00958 751 aaKnown RBP3.32□□□□□ -1.88
CTK2YJL006C PMR1P13586 950 aa3.32□□□□□ -1.88
CTK2YJL006C FUN19P28003 413 aaPredicted RBP3.32□□□□□ -1.88
CTK2YJL006C MFT1P33441 392 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms