RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	CDC6	P09119	513 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	PCT1	P13259	424 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	AMD2	P22580	549 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
UBP7	YIL156W	YBR139W	P38109	508 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	ARA1	P38115	344 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	YBL028C	P38202	106 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	AIM10	P39965	576 aa	Known RBP	4.94	□□□□□ -1.62
UBP7	YIL156W	ALD5	P40047	520 aa	Known RBP	4.94	□□□□□ -1.62
UBP7	YIL156W	CIN1	P40987	1014 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	LOC1	P43586	204 aa	Predicted RBP	4.94	□□□□□ -1.62
UBP7	YIL156W	YGR127W	P53275	312 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	SMA2	Q04658	369 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	VAM3	Q12241	283 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	RBD2	Q12270	262 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	LDB17	Q12342	491 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	MSB1	P21339	1137 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	PET18	P25362	215 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	SAF1	P38352	637 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	YMR124W	P39523	943 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	YER034W	P40022	185 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	GCD14	P46959	383 aa	Predicted RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	IST1	P53843	298 aa	Predicted RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	OCA2	P53949	197 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	RPS15	Q01855	142 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	MFM1	Q02783	413 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	SEG1	Q04279	960 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	COQ9	Q05779	260 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	YDL242W	Q07746	117 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	PDR5	P33302	1511 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	CAR2	P07991	424 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	RPB4	P20433	221 aa	Predicted RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	SAG1	P20840	650 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	SOF1	P33750	489 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	SNU114	P36048	1008 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	NUP133	P36161	1157 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	BZZ1	P38822	633 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	CSI1	Q04368	295 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	DIS3	Q08162	1001 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	YPL216W	Q08964	1102 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	SAM1	P10659	382 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	RNA1	P11745	407 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	YPK1	P12688	680 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	CDC42	P19073	191 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	KAR4	P25583	335 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	HIR2	P32480	875 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	PEX18	P38855	283 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	ECM10	P39987	644 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	INA22	P40576	216 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	VPS62	P53285	467 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	ERG5	P54781	538 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	UBP16	Q02863	499 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	NDL1	Q06568	189 aa		4.93	□□□□□ -1.62
UBP7	YIL156W	SLK19	Q08581	821 aa	Known RBP	4.93	□□□□□ -1.62
UBP7	YIL156W	LEU4	P06208	619 aa	Known RBP	4.92	□□□□□ -1.62
UBP7	YIL156W	YKL070W	P36087	169 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	RPF2	P36160	344 aa	Known RBP	4.92	□□□□□ -1.62
UBP7	YIL156W	ASC1	P38011	319 aa	Known RBP	4.92	□□□□□ -1.62
UBP7	YIL156W	TOM71	P38825	639 aa	Known RBP	4.92	□□□□□ -1.62
UBP7	YIL156W	SEC9	P40357	651 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	AIM20	P40451	204 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	YFR020W	P43600	232 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	PRY1	P47032	299 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	YGR130C	P53278	816 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	COQ6	P53318	479 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	YNL050C	P53952	270 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	STE23	Q06010	1027 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	SPS4	P09937	338 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	FUB1	P25659	250 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	RIM1	P32445	135 aa	Known RBP	4.92	□□□□□ -1.62
UBP7	YIL156W	MSN4	P33749	630 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	GCN20	P43535	752 aa	Known RBP	4.92	□□□□□ -1.62
UBP7	YIL156W	PTR3	P43606	678 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	AMA1	P50082	593 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	YNL092W	P53934	400 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	YOL159C	Q08300	171 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	PLP2	Q12017	286 aa		4.92	□□□□□ -1.62
UBP7	YIL156W	LAC1	P28496	418 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	LHS1	P36016	881 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	ICS2	P38284	255 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	ETP1	P38748	585 aa	Known RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	ATC1	Q04005	294 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	NOP12	Q08208	459 aa	Known RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	CRT10	Q08226	957 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	PCL8	Q08966	492 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	MRH1	Q12117	320 aa	Predicted RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	VPS3	P23643	1011 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	RPN11	P43588	306 aa	Known RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	BUD17	P53727	317 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	BOS1	P25385	244 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	RAD14	P28519	371 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	SMY1	P32364	656 aa	Known RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	ARC19	P33204	171 aa	Known RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	PTK1	P36002	662 aa	Predicted RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	YBR053C	P38235	358 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	KEL1	P38853	1164 aa	Known RBP	4.91	□□□□□ -1.62
UBP7	YIL156W	OPT1	P40897	799 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	MUP1	P50276	574 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	YGL185C	P53100	379 aa		4.91	□□□□□ -1.62
UBP7	YIL156W	EKI1	Q03764	534 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms