RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C CAB3P36076 571 aa12.68□□□□□ -0.38
SHU1YHL006C CBP4P37267 147 aa12.68□□□□□ -0.38
SHU1YHL006C OAF1P39720 1047 aaPredicted RBP12.68□□□□□ -0.38
SHU1YHL006C JHD2P47156 728 aaPredicted RBP12.68□□□□□ -0.38
SHU1YHL006C YPT32P51996 222 aaKnown RBP12.68□□□□□ -0.38
SHU1YHL006C GIP3Q03016 1276 aa12.68□□□□□ -0.38
SHU1YHL006C GPB1Q08886 897 aa12.68□□□□□ -0.38
SHU1YHL006C ERG1P32476 496 aaKnown RBP12.67□□□□□ -0.38
SHU1YHL006C CDC5P32562 705 aa12.67□□□□□ -0.38
SHU1YHL006C UGP1P32861 499 aaKnown RBP12.67□□□□□ -0.38
SHU1YHL006C LIA1P47120 325 aaKnown RBP12.67□□□□□ -0.38
SHU1YHL006C LSM3P57743 89 aaKnown RBP12.67□□□□□ -0.38
SHU1YHL006C GAS3Q03655 524 aa12.67□□□□□ -0.38
SHU1YHL006C YDR338CQ05497 695 aa12.67□□□□□ -0.38
SHU1YHL006C STE23Q06010 1027 aa12.67□□□□□ -0.38
SHU1YHL006C MXR2P25566 168 aa12.66□□□□□ -0.38
SHU1YHL006C NIP1P32497 812 aaKnown RBP12.66□□□□□ -0.38
SHU1YHL006C SEF1P34228 1148 aa12.66□□□□□ -0.38
SHU1YHL006C PFK26P40433 827 aaKnown RBP12.66□□□□□ -0.38
SHU1YHL006C GUS1P46655 708 aaKnown RBP RIP-Chip data12.66□□□□□ -0.38not detected
SHU1YHL006C YJR154WP47181 346 aa12.66□□□□□ -0.38
SHU1YHL006C RCF2P53721 224 aa12.66□□□□□ -0.38
SHU1YHL006C YML131WQ03102 365 aa12.66□□□□□ -0.38
SHU1YHL006C ENT4Q07872 247 aa12.66□□□□□ -0.38
SHU1YHL006C YOL024WQ08172 172 aa12.66□□□□□ -0.38
SHU1YHL006C RRP40Q08285 240 aaKnown RBP12.66□□□□□ -0.38
SHU1YHL006C FAS1P07149 2051 aaKnown RBP12.65□□□□□ -0.38
SHU1YHL006C LEU4P06208 619 aaKnown RBP12.65□□□□□ -0.38
SHU1YHL006C BAS1P22035 811 aa12.65□□□□□ -0.38
SHU1YHL006C SGV1P23293 657 aaKnown RBP12.65□□□□□ -0.38
SHU1YHL006C MRPL32P25348 183 aa12.65□□□□□ -0.38
SHU1YHL006C MGR1P25573 417 aa12.65□□□□□ -0.38
SHU1YHL006C FUN30P31380 1131 aa12.65□□□□□ -0.38
SHU1YHL006C YSC84P32793 468 aa12.65□□□□□ -0.38
SHU1YHL006C RPS1AP33442 255 aaKnown RBP12.65□□□□□ -0.38
SHU1YHL006C BMT2P38278 337 aa12.65□□□□□ -0.38
SHU1YHL006C UTP9P38882 575 aaKnown RBP12.65□□□□□ -0.38
SHU1YHL006C YIL152WP40455 235 aa12.65□□□□□ -0.38
SHU1YHL006C GCD10P41814 478 aa12.65□□□□□ -0.38
SHU1YHL006C MET12P46151 657 aa12.65□□□□□ -0.38
SHU1YHL006C FAR3P46671 204 aa12.65□□□□□ -0.38
SHU1YHL006C HOC1P47124 396 aa12.65□□□□□ -0.38
SHU1YHL006C ROG1P53118 685 aa12.65□□□□□ -0.38
SHU1YHL006C SDH1Q00711 640 aa12.65□□□□□ -0.38
SHU1YHL006C TPP1Q03796 238 aa12.65□□□□□ -0.38
SHU1YHL006C HDA3Q06623 655 aa12.65□□□□□ -0.38
SHU1YHL006C XYL2Q07993 356 aa12.65□□□□□ -0.38
SHU1YHL006C YOL159CQ08300 171 aa12.65□□□□□ -0.38
SHU1YHL006C RHO2P06781 192 aa12.64□□□□□ -0.39
SHU1YHL006C HOM3P10869 527 aa12.64□□□□□ -0.39
SHU1YHL006C NMT1P14743 455 aa12.64□□□□□ -0.39
SHU1YHL006C KAP122P32767 1081 aa12.64□□□□□ -0.39
SHU1YHL006C RPS27AP35997 82 aaKnown RBP12.64□□□□□ -0.39
SHU1YHL006C RRN3P36070 627 aa12.64□□□□□ -0.39
SHU1YHL006C ASC1P38011 319 aaKnown RBP12.64□□□□□ -0.39
SHU1YHL006C RPS27BP38711 82 aa12.64□□□□□ -0.39
SHU1YHL006C YDR089WP38966 869 aa12.64□□□□□ -0.39
SHU1YHL006C SAP1P39955 897 aaKnown RBP12.64□□□□□ -0.39
SHU1YHL006C MAD2P40958 196 aa12.64□□□□□ -0.39
SHU1YHL006C PAC11P40960 533 aa12.64□□□□□ -0.39
SHU1YHL006C FKH2P41813 862 aa12.64□□□□□ -0.39
SHU1YHL006C TEL2P53038 688 aa12.64□□□□□ -0.39
SHU1YHL006C DFG5Q05031 458 aa12.64□□□□□ -0.39
SHU1YHL006C TMA46Q12000 345 aaKnown RBP12.64□□□□□ -0.39
SHU1YHL006C HSC82P15108 705 aaKnown RBP12.63□□□□□ -0.39
SHU1YHL006C GBP2P25555 427 aaKnown RBP RIP-Chip data12.63□□□□□ -0.39not detected
SHU1YHL006C SUI1P32911 108 aaKnown RBP12.63□□□□□ -0.39
SHU1YHL006C OAF3P36023 863 aa12.63□□□□□ -0.39
SHU1YHL006C YBR071WP38243 211 aa12.63□□□□□ -0.39
SHU1YHL006C LIN1P38852 340 aaPredicted RBP12.63□□□□□ -0.39
SHU1YHL006C NEO1P40527 1151 aa12.63□□□□□ -0.39
SHU1YHL006C RPL10P41805 221 aaKnown RBP12.63□□□□□ -0.39
SHU1YHL006C YGR012WP53206 393 aa12.63□□□□□ -0.39
SHU1YHL006C MPS1P54199 764 aa12.63□□□□□ -0.39
SHU1YHL006C UBX4P54730 416 aa12.63□□□□□ -0.39
SHU1YHL006C ERG13P54839 491 aaKnown RBP12.63□□□□□ -0.39
SHU1YHL006C YPL109CQ02981 657 aa12.63□□□□□ -0.39
SHU1YHL006C BSC2Q05611 235 aa12.63□□□□□ -0.39
SHU1YHL006C BOP2Q06150 570 aa12.63□□□□□ -0.39
SHU1YHL006C YOL019WQ08157 551 aa12.63□□□□□ -0.39
SHU1YHL006C SLH1P53327 1967 aaKnown RBP12.62□□□□□ -0.39
SHU1YHL006C SPS22P25380 463 aa12.62□□□□□ -0.39
SHU1YHL006C TAH1P25638 111 aaPredicted RBP12.62□□□□□ -0.39
SHU1YHL006C COX13P32799 129 aa12.62□□□□□ -0.39
SHU1YHL006C YKR078WP36158 585 aaKnown RBP12.62□□□□□ -0.39
SHU1YHL006C MBP1P39678 833 aa12.62□□□□□ -0.39
SHU1YHL006C YLR049CQ12110 428 aa12.62□□□□□ -0.39
SHU1YHL006C RUP1Q12242 671 aa12.62□□□□□ -0.39
SHU1YHL006C YCL012CQ8J0M4 134 aa12.62□□□□□ -0.39
SHU1YHL006C COX1P00401 534 aa12.61□□□□□ -0.39
SHU1YHL006C KIP2P28743 706 aa12.61□□□□□ -0.39
SHU1YHL006C FAA1P30624 700 aaKnown RBP12.61□□□□□ -0.39
SHU1YHL006C CDC12P32468 407 aaKnown RBP12.61□□□□□ -0.39
SHU1YHL006C MKK2P32491 506 aa12.61□□□□□ -0.39
SHU1YHL006C YGL260WP53056 76 aa12.61□□□□□ -0.39
SHU1YHL006C GTR2P53290 341 aa12.61□□□□□ -0.39
SHU1YHL006C PRP38Q00723 242 aaPredicted RBP12.61□□□□□ -0.39
SHU1YHL006C MUS81Q04149 632 aaPredicted RBP12.61□□□□□ -0.39
SHU1YHL006C REX4Q08237 289 aa12.61□□□□□ -0.39
SHU1YHL006C PNS1Q12412 539 aa12.61□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms