RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W ATG16Q03818 150 aa2.15□□□□□ -2.07
RTT102YGR275W RAD30Q04049 632 aa2.15□□□□□ -2.07
RTT102YGR275W VMS1Q04311 632 aaKnown RBP2.15□□□□□ -2.07
RTT102YGR275W MRPL51Q06090 140 aaPredicted RBP2.15□□□□□ -2.07
RTT102YGR275W ENT4Q07872 247 aa2.15□□□□□ -2.07
RTT102YGR275W YOR387CQ08910 206 aa2.15□□□□□ -2.07
RTT102YGR275W SKM1Q12469 655 aa2.15□□□□□ -2.07
RTT102YGR275W FUM1P08417 488 aaKnown RBP2.14□□□□□ -2.07
RTT102YGR275W CDC24P11433 854 aaPredicted RBP2.14□□□□□ -2.07
RTT102YGR275W PMR1P13586 950 aa2.14□□□□□ -2.07
RTT102YGR275W KGD1P20967 1014 aaKnown RBP2.14□□□□□ -2.07
RTT102YGR275W SGF29P25554 259 aa2.14□□□□□ -2.07
RTT102YGR275W YCR022CP25620 114 aa2.14□□□□□ -2.07
RTT102YGR275W SYN8P31377 255 aa2.14□□□□□ -2.07
RTT102YGR275W PRS1P32895 427 aaKnown RBP2.14□□□□□ -2.07
RTT102YGR275W YBR144CP34215 104 aa2.14□□□□□ -2.07
RTT102YGR275W NUP133P36161 1157 aa2.14□□□□□ -2.07
RTT102YGR275W IES5P40060 125 aa2.14□□□□□ -2.07
RTT102YGR275W ALG8P40351 577 aa2.14□□□□□ -2.07
RTT102YGR275W TPM2P40414 161 aa2.14□□□□□ -2.07
RTT102YGR275W SCD6P45978 349 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RTT102YGR275W LYS4P49367 693 aaPredicted RBP2.14□□□□□ -2.07
RTT102YGR275W BSC5P53755 489 aa2.14□□□□□ -2.07
RTT102YGR275W IRC15Q02733 499 aa2.14□□□□□ -2.07
RTT102YGR275W BUD22Q04347 519 aaKnown RBP2.14□□□□□ -2.07
RTT102YGR275W BNA5Q05979 453 aa2.14□□□□□ -2.07
RTT102YGR275W VPS74Q06385 345 aa2.14□□□□□ -2.07
RTT102YGR275W VIP1Q06685 1146 aaKnown RBP2.14□□□□□ -2.07
RTT102YGR275W YDL057WQ07379 328 aa2.14□□□□□ -2.07
RTT102YGR275W HNT3Q08702 217 aa2.14□□□□□ -2.07
RTT102YGR275W GCN2P15442 1659 aa2.13□□□□□ -2.07
RTT102YGR275W MF(ALPHA)1P01149 165 aa2.13□□□□□ -2.07
RTT102YGR275W ARD1P07347 238 aaPredicted RBP2.13□□□□□ -2.07
RTT102YGR275W EXO70P19658 623 aa2.13□□□□□ -2.07
RTT102YGR275W SGV1P23293 657 aaKnown RBP2.13□□□□□ -2.07
RTT102YGR275W DEG1P31115 442 aaKnown RBP2.13□□□□□ -2.07
RTT102YGR275W SSE2P32590 693 aaKnown RBP2.13□□□□□ -2.07
RTT102YGR275W CIN4P39110 191 aa2.13□□□□□ -2.07
RTT102YGR275W AFG3P39925 761 aa2.13□□□□□ -2.07
RTT102YGR275W SIM1P40472 476 aa2.13□□□□□ -2.07
RTT102YGR275W YJR154WP47181 346 aa2.13□□□□□ -2.07
RTT102YGR275W BTN2P53286 410 aa2.13□□□□□ -2.07
RTT102YGR275W MSO1P53604 210 aaKnown RBP2.13□□□□□ -2.07
RTT102YGR275W SLD5Q03406 294 aa2.13□□□□□ -2.07
RTT102YGR275W IMH1Q06704 911 aaKnown RBP2.13□□□□□ -2.07
RTT102YGR275W LUC7Q07508 261 aaPredicted RBP2.13□□□□□ -2.07
RTT102YGR275W YDL012CQ12489 107 aa2.13□□□□□ -2.07
RTT102YGR275W LPD1P09624 499 aaKnown RBP2.12□□□□□ -2.07
RTT102YGR275W YCR007CP25354 239 aa2.12□□□□□ -2.07
RTT102YGR275W NAM9P27929 486 aa2.12□□□□□ -2.07
RTT102YGR275W FUN19P28003 413 aaPredicted RBP2.12□□□□□ -2.07
RTT102YGR275W SPR1P32603 445 aa2.12□□□□□ -2.07
RTT102YGR275W FRE1P32791 686 aa2.12□□□□□ -2.07
RTT102YGR275W YME1P32795 747 aa2.12□□□□□ -2.07
RTT102YGR275W UBP11P36026 717 aa2.12□□□□□ -2.07
RTT102YGR275W RFS1P38234 210 aaKnown RBP2.12□□□□□ -2.07
RTT102YGR275W YHR210CP38893 341 aa2.12□□□□□ -2.07
RTT102YGR275W YJR008WP47085 338 aa2.12□□□□□ -2.07
RTT102YGR275W YLR152CP54072 576 aa2.12□□□□□ -2.07
RTT102YGR275W MSC1Q03104 513 aa2.12□□□□□ -2.07
RTT102YGR275W IVY1Q04934 453 aa2.12□□□□□ -2.07
RTT102YGR275W NCE102Q12207 173 aaRIP-Chip data2.12□□□□□ -2.07not detected
RTT102YGR275W LSP1Q12230 341 aaKnown RBP2.12□□□□□ -2.07
RTT102YGR275W ENT1Q12518 454 aa2.12□□□□□ -2.07
RTT102YGR275W RRP12Q12754 1228 aaKnown RBP2.12□□□□□ -2.07
RTT102YGR275W YER078W-AQ3E7A2 54 aa2.12□□□□□ -2.07
RTT102YGR275W PDR5P33302 1511 aaKnown RBP2.12□□□□□ -2.07
RTT102YGR275W CAT8P39113 1433 aa2.11□□□□□ -2.07
RTT102YGR275W RAD52P06778 471 aaKnown RBP2.11□□□□□ -2.07
RTT102YGR275W CPR1P14832 162 aaKnown RBP2.11□□□□□ -2.07
RTT102YGR275W PUT3P25502 979 aaPredicted RBP2.11□□□□□ -2.07
RTT102YGR275W YIH1P25637 258 aa2.11□□□□□ -2.07
RTT102YGR275W UTR4P32626 227 aa2.11□□□□□ -2.07
RTT102YGR275W YBL029WP38201 376 aa2.11□□□□□ -2.07
RTT102YGR275W NDT80P38830 627 aa2.11□□□□□ -2.07
RTT102YGR275W ELP2P42935 788 aa2.11□□□□□ -2.07
RTT102YGR275W APT1P49435 187 aaKnown RBP2.11□□□□□ -2.07
RTT102YGR275W YOR365CQ08844 703 aa2.11□□□□□ -2.07
RTT102YGR275W FMP40Q08968 688 aaPredicted RBP2.11□□□□□ -2.07
RTT102YGR275W CTF3Q12748 733 aa2.11□□□□□ -2.07
RTT102YGR275W HSH49Q99181 213 aaPredicted RBP2.11□□□□□ -2.07
RTT102YGR275W SPT15P13393 240 aaKnown RBP2.1□□□□□ -2.07
RTT102YGR275W MRP4P32902 394 aa2.1□□□□□ -2.07
RTT102YGR275W PAD1P33751 242 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
RTT102YGR275W HAT2P39984 401 aa2.1□□□□□ -2.07
RTT102YGR275W YSA1Q01976 231 aa2.1□□□□□ -2.07
RTT102YGR275W YML131WQ03102 365 aa2.1□□□□□ -2.07
RTT102YGR275W YML037CQ03703 340 aa2.1□□□□□ -2.07
RTT102YGR275W PHO92Q06390 306 aa2.1□□□□□ -2.07
RTT102YGR275W YPL272CQ08984 517 aa2.1□□□□□ -2.07
RTT102YGR275W RRP5Q05022 1729 aaKnown RBP2.1□□□□□ -2.07
RTT102YGR275W GEA1P47102 1408 aaPredicted RBP2.09□□□□□ -2.07
RTT102YGR275W SUC2P00724 532 aa2.09□□□□□ -2.07
RTT102YGR275W ART10P18634 518 aaKnown RBP2.09□□□□□ -2.07
RTT102YGR275W YCK1P23291 538 aa2.09□□□□□ -2.07
RTT102YGR275W POL4P25615 582 aa2.09□□□□□ -2.07
RTT102YGR275W PWP2P25635 923 aaKnown RBP2.09□□□□□ -2.07
RTT102YGR275W YIM1P28625 365 aa2.09□□□□□ -2.07
RTT102YGR275W SHP1P34223 423 aa2.09□□□□□ -2.07
RTT102YGR275W YBL059WP34224 193 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms