RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W CBP4P37267 147 aa5.29□□□□□ -1.56
SHE10YGL228W GIC1P38785 314 aa5.29□□□□□ -1.56
SHE10YGL228W ATG7P38862 630 aa5.29□□□□□ -1.56
SHE10YGL228W NDE1P40215 560 aa5.29□□□□□ -1.56
SHE10YGL228W CAB2P40506 365 aa5.29□□□□□ -1.56
SHE10YGL228W FMP32P43557 207 aa5.29□□□□□ -1.56
SHE10YGL228W MTR3P48240 250 aaPredicted RBP5.29□□□□□ -1.56
SHE10YGL228W KXD1P53158 218 aa5.29□□□□□ -1.56
SHE10YGL228W ERP6P53198 216 aa5.29□□□□□ -1.56
SHE10YGL228W ERG26P53199 349 aaKnown RBP5.29□□□□□ -1.56
SHE10YGL228W CAF120P53836 1060 aa5.29□□□□□ -1.56
SHE10YGL228W ECM11Q04110 302 aa5.29□□□□□ -1.56
SHE10YGL228W HSP31Q04432 237 aa5.29□□□□□ -1.56
SHE10YGL228W YML053CQ04978 212 aa5.29□□□□□ -1.56
SHE10YGL228W YHC1Q05900 231 aaKnown RBP5.29□□□□□ -1.56
SHE10YGL228W EAF1Q06337 982 aa5.29□□□□□ -1.56
SHE10YGL228W YFT2Q06676 274 aa5.29□□□□□ -1.56
SHE10YGL228W YOL159CQ08300 171 aa5.29□□□□□ -1.56
SHE10YGL228W YIG1Q08956 461 aa5.29□□□□□ -1.56
SHE10YGL228W SUL2Q12325 893 aa5.29□□□□□ -1.56
SHE10YGL228W RAS2P01120 322 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W ARG3P05150 338 aa5.28□□□□□ -1.56
SHE10YGL228W RPS21AP0C0V8 87 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W KIN2P13186 1147 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W RED1P14291 827 aa5.28□□□□□ -1.56
SHE10YGL228W TRM1P15565 570 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W CSM1P25651 190 aa5.28□□□□□ -1.56
SHE10YGL228W MEI5P32489 222 aa5.28□□□□□ -1.56
SHE10YGL228W MRPL37P36532 105 aa5.28□□□□□ -1.56
SHE10YGL228W PDX3P38075 228 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W ROT2P38138 954 aa5.28□□□□□ -1.56
SHE10YGL228W IST2P38250 946 aa5.28□□□□□ -1.56
SHE10YGL228W GGC1P38988 300 aa5.28□□□□□ -1.56
SHE10YGL228W AYR1P40471 297 aa5.28□□□□□ -1.56
SHE10YGL228W IMA5P40884 581 aa5.28□□□□□ -1.56
SHE10YGL228W SSU1P41930 458 aa5.28□□□□□ -1.56
SHE10YGL228W ZIM17P42844 174 aa5.28□□□□□ -1.56
SHE10YGL228W NOP9P47077 666 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W HOT1Q03213 719 aa5.28□□□□□ -1.56
SHE10YGL228W NSL1Q12143 216 aa5.28□□□□□ -1.56
SHE10YGL228W ACC1Q00955 2233 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W COX3P00420 269 aa5.28□□□□□ -1.56
SHE10YGL228W MSS116P15424 664 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W PPH21P23594 369 aa5.28□□□□□ -1.56
SHE10YGL228W PHO87P25360 923 aa5.28□□□□□ -1.56
SHE10YGL228W AAR2P32357 355 aaPredicted RBP5.28□□□□□ -1.56
SHE10YGL228W NRP1P32770 719 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SHE10YGL228W YCR087C-AP37263 153 aa5.28□□□□□ -1.56
SHE10YGL228W TRM7P38238 310 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W YBR071WP38243 211 aa5.28□□□□□ -1.56
SHE10YGL228W PCF11P39081 626 aaPredicted RBP5.28□□□□□ -1.56
SHE10YGL228W PLB1P39105 664 aa5.28□□□□□ -1.56
SHE10YGL228W VRG4P40107 337 aa5.28□□□□□ -1.56
SHE10YGL228W AIM22P47051 409 aa5.28□□□□□ -1.56
SHE10YGL228W ILM1P47155 203 aa5.28□□□□□ -1.56
SHE10YGL228W BIO3P50277 480 aa5.28□□□□□ -1.56
SHE10YGL228W DIA3P52290 468 aa5.28□□□□□ -1.56
SHE10YGL228W SWS2P53937 143 aa5.28□□□□□ -1.56
SHE10YGL228W YNL033WP53964 284 aa5.28□□□□□ -1.56
SHE10YGL228W YNL019CP53975 284 aa5.28□□□□□ -1.56
SHE10YGL228W IDP3P53982 420 aaKnown RBP5.28□□□□□ -1.56
SHE10YGL228W YMR010WQ03687 405 aa5.28□□□□□ -1.56
SHE10YGL228W GGA1Q06336 557 aa5.28□□□□□ -1.56
SHE10YGL228W YLR111WQ12528 110 aa5.28□□□□□ -1.56
SHE10YGL228W ADF1Q2V2Q1 113 aa5.28□□□□□ -1.56
SHE10YGL228W TOR2P32600 2474 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W MRP13P12686 339 aa5.27□□□□□ -1.57
SHE10YGL228W YAP1P19880 650 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W PRI2P20457 528 aa5.27□□□□□ -1.57
SHE10YGL228W IDH2P28241 369 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W SIN4P32259 974 aa5.27□□□□□ -1.57
SHE10YGL228W TFC1P32367 649 aa5.27□□□□□ -1.57
SHE10YGL228W PET309P32522 965 aaPredicted RBP5.27□□□□□ -1.57
SHE10YGL228W SEC17P32602 292 aa5.27□□□□□ -1.57
SHE10YGL228W PEX6P33760 1030 aa5.27□□□□□ -1.57
SHE10YGL228W KKQ8P36004 724 aa5.27□□□□□ -1.57
SHE10YGL228W UBP14P38237 781 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W COS111P38308 924 aa5.27□□□□□ -1.57
SHE10YGL228W TDP1P38319 544 aa5.27□□□□□ -1.57
SHE10YGL228W FAD1P38913 306 aa5.27□□□□□ -1.57
SHE10YGL228W RGA1P39083 1007 aa5.27□□□□□ -1.57
SHE10YGL228W RGI1P40043 161 aaPredicted RBP5.27□□□□□ -1.57
SHE10YGL228W MET12P46151 657 aa5.27□□□□□ -1.57
SHE10YGL228W CIS3P47001 227 aa5.27□□□□□ -1.57
SHE10YGL228W HXT16P47185 567 aa5.27□□□□□ -1.57
SHE10YGL228W UPF3P48412 387 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W MUP1P50276 574 aa5.27□□□□□ -1.57
SHE10YGL228W COS6P53344 381 aa5.27□□□□□ -1.57
SHE10YGL228W YNL140CP53910 189 aa5.27□□□□□ -1.57
SHE10YGL228W HXT15P54854 567 aa5.27□□□□□ -1.57
SHE10YGL228W NAN1Q02931 896 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W EFR3Q03653 782 aaKnown RBP5.27□□□□□ -1.57
SHE10YGL228W TRM82Q03774 444 aa5.27□□□□□ -1.57
SHE10YGL228W SPC2Q04969 178 aa5.27□□□□□ -1.57
SHE10YGL228W MUM3Q08750 479 aa5.27□□□□□ -1.57
SHE10YGL228W MLH3Q12083 715 aa5.27□□□□□ -1.57
SHE10YGL228W SNF8Q12483 233 aa5.27□□□□□ -1.57
SHE10YGL228W TY4A-HQ6Q5P6 413 aa5.27□□□□□ -1.57
SHE10YGL228W NHA1Q99271 985 aa5.27□□□□□ -1.57
SHE10YGL228W CYR1P08678 2026 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms