RNA–Protein interactions for RNA: YFR056C

YFR056C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR056C, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR056CYFR056C ARP10Q04549 284 aa2.3□□□□□ -2.04
YFR056CYFR056C RSF1Q05043 376 aa2.3□□□□□ -2.04
YFR056CYFR056C ADE13Q05911 482 aaKnown RBP2.3□□□□□ -2.04
YFR056CYFR056C SPE3Q12074 293 aaKnown RBP2.3□□□□□ -2.04
YFR056CYFR056C SMF3Q12078 473 aaPredicted RBP2.3□□□□□ -2.04
YFR056CYFR056C RAV1P47104 1357 aa2.29□□□□□ -2.04
YFR056CYFR056C RPL31BP0C2H9 113 aaKnown RBP2.29□□□□□ -2.04
YFR056CYFR056C PRP16P15938 1071 aaPredicted RBP2.29□□□□□ -2.04
YFR056CYFR056C CPR2P23285 205 aa2.29□□□□□ -2.04
YFR056CYFR056C BUD5P25300 642 aaPredicted RBP2.29□□□□□ -2.04
YFR056CYFR056C ELO2P25358 347 aa2.29□□□□□ -2.04
YFR056CYFR056C SPB1P25582 841 aaPredicted RBP2.29□□□□□ -2.04
YFR056CYFR056C YIM1P28625 365 aa2.29□□□□□ -2.04
YFR056CYFR056C RML2P32611 393 aa2.29□□□□□ -2.04
YFR056CYFR056C STV1P37296 890 aa2.29□□□□□ -2.04
YFR056CYFR056C SLM4P38247 162 aa2.29□□□□□ -2.04
YFR056CYFR056C ARP1P38696 384 aa2.29□□□□□ -2.04
YFR056CYFR056C HXT9P40885 567 aa2.29□□□□□ -2.04
YFR056CYFR056C IAH1P41734 238 aa2.29□□□□□ -2.04
YFR056CYFR056C VMA13P41807 478 aaKnown RBP2.29□□□□□ -2.04
YFR056CYFR056C BUD27P43573 796 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
YFR056CYFR056C YGR149WP48236 432 aa2.29□□□□□ -2.04
YFR056CYFR056C YGR126WP53274 230 aa2.29□□□□□ -2.04
YFR056CYFR056C KTR5P53966 522 aaPredicted RBP2.29□□□□□ -2.04
YFR056CYFR056C YVH1Q02256 364 aaKnown RBP2.29□□□□□ -2.04
YFR056CYFR056C SMA1Q02651 245 aa2.29□□□□□ -2.04
YFR056CYFR056C YMR160WQ03823 816 aa2.29□□□□□ -2.04
YFR056CYFR056C SOV1Q04748 898 aa2.29□□□□□ -2.04
YFR056CYFR056C HEL2Q05580 639 aaKnown RBP2.29□□□□□ -2.04
YFR056CYFR056C DON1Q05610 365 aa2.29□□□□□ -2.04
YFR056CYFR056C CUE5Q08412 411 aaKnown RBP2.29□□□□□ -2.04
YFR056CYFR056C PGC1Q08959 321 aa2.29□□□□□ -2.04
YFR056CYFR056C VPS54Q12071 889 aa2.29□□□□□ -2.04
YFR056CYFR056C CFT2Q12102 859 aaPredicted RBP2.29□□□□□ -2.04
YFR056CYFR056C NFI1Q12216 726 aa2.29□□□□□ -2.04
YFR056CYFR056C RPN5Q12250 445 aaKnown RBP2.29□□□□□ -2.04
YFR056CYFR056C FRE6Q12473 712 aa2.29□□□□□ -2.04
YFR056CYFR056C COR1P07256 457 aa2.28□□□□□ -2.04
YFR056CYFR056C PUT2P07275 575 aa2.28□□□□□ -2.04
YFR056CYFR056C BAR1P12630 587 aa2.28□□□□□ -2.04
YFR056CYFR056C SRV2P17555 526 aaKnown RBP2.28□□□□□ -2.04
YFR056CYFR056C CLC1P17891 233 aa2.28□□□□□ -2.04
YFR056CYFR056C URA4P20051 364 aa2.28□□□□□ -2.04
YFR056CYFR056C RPB8P20436 146 aa2.28□□□□□ -2.04
YFR056CYFR056C SUI2P20459 304 aaKnown RBP2.28□□□□□ -2.04
YFR056CYFR056C IDH2P28241 369 aaKnown RBP2.28□□□□□ -2.04
YFR056CYFR056C SEC1P30619 724 aaKnown RBP2.28□□□□□ -2.04
YFR056CYFR056C AFG1P32317 509 aa2.28□□□□□ -2.04
YFR056CYFR056C MIA40P36046 403 aa2.28□□□□□ -2.04
YFR056CYFR056C RIM2P38127 377 aa2.28□□□□□ -2.04
YFR056CYFR056C SDS24P38314 527 aa2.28□□□□□ -2.04
YFR056CYFR056C POP2P39008 433 aa2.28□□□□□ -2.04
YFR056CYFR056C SNG1P46950 547 aa2.28□□□□□ -2.04
YFR056CYFR056C YGL138CP53122 345 aa2.28□□□□□ -2.04
YFR056CYFR056C YGL108CP53139 140 aa2.28□□□□□ -2.04
YFR056CYFR056C TOF2Q02208 771 aa2.28□□□□□ -2.04
YFR056CYFR056C YPL107WQ02873 248 aa2.28□□□□□ -2.04
YFR056CYFR056C RRP45Q05636 305 aaKnown RBP2.28□□□□□ -2.04
YFR056CYFR056C ATG26Q06321 1198 aa2.28□□□□□ -2.04
YFR056CYFR056C CDC45Q08032 650 aa2.28□□□□□ -2.04
YFR056CYFR056C THP1Q08231 455 aa2.28□□□□□ -2.04
YFR056CYFR056C DCI1Q08558 271 aa2.28□□□□□ -2.04
YFR056CYFR056C EDE1P34216 1381 aa2.27□□□□□ -2.05
YFR056CYFR056C LPD1P09624 499 aaKnown RBP2.27□□□□□ -2.05
YFR056CYFR056C SPS4P09937 338 aa2.27□□□□□ -2.05
YFR056CYFR056C SNF3P10870 884 aa2.27□□□□□ -2.05
YFR056CYFR056C CLN1P20437 546 aa2.27□□□□□ -2.05
YFR056CYFR056C SNT1P25357 1226 aa2.27□□□□□ -2.05
YFR056CYFR056C RAD14P28519 371 aa2.27□□□□□ -2.05
YFR056CYFR056C PUP2P32379 260 aa2.27□□□□□ -2.05
YFR056CYFR056C ARA1P38115 344 aa2.27□□□□□ -2.05
YFR056CYFR056C NTC20P38302 140 aaPredicted RBP2.27□□□□□ -2.05
YFR056CYFR056C KEL1P38853 1164 aaKnown RBP2.27□□□□□ -2.05
YFR056CYFR056C MBB1P39534 108 aa2.27□□□□□ -2.05
YFR056CYFR056C SER3P40054 469 aa2.27□□□□□ -2.05
YFR056CYFR056C YIL060WP40519 144 aa2.27□□□□□ -2.05
YFR056CYFR056C PYK2P52489 506 aaKnown RBP2.27□□□□□ -2.05
YFR056CYFR056C PKP2P53170 491 aa2.27□□□□□ -2.05
YFR056CYFR056C YGR111WP53265 400 aa2.27□□□□□ -2.05
YFR056CYFR056C BUD32P53323 261 aa2.27□□□□□ -2.05
YFR056CYFR056C SMM1P53720 384 aaKnown RBP2.27□□□□□ -2.05
YFR056CYFR056C EKI1Q03764 534 aa2.27□□□□□ -2.05
YFR056CYFR056C TAP42Q04372 366 aa2.27□□□□□ -2.05
YFR056CYFR056C MMR1Q06324 491 aa2.27□□□□□ -2.05
YFR056CYFR056C YDL218WQ07629 317 aa2.27□□□□□ -2.05
YFR056CYFR056C ETT1Q08421 412 aaKnown RBP2.27□□□□□ -2.05
YFR056CYFR056C DAP1Q12091 152 aa2.27□□□□□ -2.05
YFR056CYFR056C HIF1Q12373 385 aa2.27□□□□□ -2.05
YFR056CYFR056C HIP1P06775 603 aa2.26□□□□□ -2.05
YFR056CYFR056C PEP4P07267 405 aaKnown RBP2.26□□□□□ -2.05
YFR056CYFR056C TRX1P22217 103 aaKnown RBP2.26□□□□□ -2.05
YFR056CYFR056C KRR1P25586 316 aaPredicted RBP2.26□□□□□ -2.05
YFR056CYFR056C MSP1P28737 362 aa2.26□□□□□ -2.05
YFR056CYFR056C LTV1P34078 463 aa2.26□□□□□ -2.05
YFR056CYFR056C YOX1P34161 385 aa2.26□□□□□ -2.05
YFR056CYFR056C MTR2P34232 184 aaKnown RBP2.26□□□□□ -2.05
YFR056CYFR056C YKL023WP36103 277 aaKnown RBP2.26□□□□□ -2.05
YFR056CYFR056C HEL1P36113 551 aa2.26□□□□□ -2.05
YFR056CYFR056C ROT2P38138 954 aa2.26□□□□□ -2.05
YFR056CYFR056C BNA4P38169 460 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms