RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SCW10Q04951 389 aa3.15□□□□□ -1.91
LOC1YFR001W KEL3Q08979 651 aaPredicted RBP3.15□□□□□ -1.91
LOC1YFR001W CFT2Q12102 859 aaPredicted RBP3.15□□□□□ -1.91
LOC1YFR001W YDL007C-AQ2V2Q0 85 aa3.15□□□□□ -1.91
LOC1YFR001W BRR1Q99177 341 aaPredicted RBP3.15□□□□□ -1.91
LOC1YFR001W HEM2P05373 342 aa3.14□□□□□ -1.91
LOC1YFR001W RPL31BP0C2H9 113 aaKnown RBP3.14□□□□□ -1.91
LOC1YFR001W MRP7P12687 371 aa3.14□□□□□ -1.91
LOC1YFR001W GLK1P17709 500 aaKnown RBP3.14□□□□□ -1.91
LOC1YFR001W PMU1P36069 295 aa3.14□□□□□ -1.91
LOC1YFR001W YHR218WP38899 603 aa3.14□□□□□ -1.91
LOC1YFR001W TWF1P53250 332 aa3.14□□□□□ -1.91
LOC1YFR001W PDS5Q04264 1277 aa3.14□□□□□ -1.91
LOC1YFR001W MRD1Q06106 887 aaKnown RBP3.14□□□□□ -1.91
LOC1YFR001W RKM5Q12367 367 aa3.14□□□□□ -1.91
LOC1YFR001W RAV1P47104 1357 aa3.13□□□□□ -1.91
LOC1YFR001W MES1P00958 751 aaKnown RBP3.13□□□□□ -1.91
LOC1YFR001W ATR1P13090 542 aa3.13□□□□□ -1.91
LOC1YFR001W CPR3P25719 182 aa3.13□□□□□ -1.91
LOC1YFR001W ATP11P32453 318 aa3.13□□□□□ -1.91
LOC1YFR001W MFT1P33441 392 aaKnown RBP3.13□□□□□ -1.91
LOC1YFR001W VID24P38263 362 aa3.13□□□□□ -1.91
LOC1YFR001W YMR147WP40218 223 aaKnown RBP3.13□□□□□ -1.91
LOC1YFR001W ALG8P40351 577 aa3.13□□□□□ -1.91
LOC1YFR001W ESL1P40456 1118 aa3.13□□□□□ -1.91
LOC1YFR001W MET18P40469 1032 aa3.13□□□□□ -1.91
LOC1YFR001W ARF3P40994 183 aaRIP-Chip data3.13□□□□□ -1.91not detected
LOC1YFR001W JJJ1P53863 590 aa3.13□□□□□ -1.91
LOC1YFR001W TAP42Q04372 366 aa3.13□□□□□ -1.91
LOC1YFR001W BUB3P26449 341 aa3.12□□□□□ -1.91
LOC1YFR001W SEC66P33754 206 aa3.12□□□□□ -1.91
LOC1YFR001W PMT1P33775 817 aa3.12□□□□□ -1.91
LOC1YFR001W CMC1P36064 111 aa3.12□□□□□ -1.91
LOC1YFR001W TUL1P36096 758 aa3.12□□□□□ -1.91
LOC1YFR001W TIF5P38431 405 aaKnown RBP3.12□□□□□ -1.91
LOC1YFR001W NDE1P40215 560 aa3.12□□□□□ -1.91
LOC1YFR001W IDP2P41939 412 aa3.12□□□□□ -1.91
LOC1YFR001W ELP2P42935 788 aa3.12□□□□□ -1.91
LOC1YFR001W IRC6P43615 237 aa3.12□□□□□ -1.91
LOC1YFR001W GWT1P47026 490 aa3.12□□□□□ -1.91
LOC1YFR001W ATG29Q12092 213 aa3.12□□□□□ -1.91
LOC1YFR001W CTF3Q12748 733 aa3.12□□□□□ -1.91
LOC1YFR001W CKA1P15790 372 aa3.11□□□□□ -1.91
LOC1YFR001W PUT3P25502 979 aaPredicted RBP3.11□□□□□ -1.91
LOC1YFR001W FUN19P28003 413 aaPredicted RBP3.11□□□□□ -1.91
LOC1YFR001W GPI10P30777 616 aa3.11□□□□□ -1.91
LOC1YFR001W UTP9P38882 575 aaKnown RBP3.11□□□□□ -1.91
LOC1YFR001W NAB3P38996 802 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
LOC1YFR001W FAU1P40099 211 aa3.11□□□□□ -1.91
LOC1YFR001W SYG1P40528 902 aa3.11□□□□□ -1.91
LOC1YFR001W POP1P41812 875 aa3.11□□□□□ -1.91
LOC1YFR001W YJL132WP47014 750 aa3.11□□□□□ -1.91
LOC1YFR001W URB2P47108 1174 aa3.11□□□□□ -1.91
LOC1YFR001W OCA1P50946 238 aaPredicted RBP3.11□□□□□ -1.91
LOC1YFR001W YGL108CP53139 140 aa3.11□□□□□ -1.91
LOC1YFR001W BOR1P53838 576 aa3.11□□□□□ -1.91
LOC1YFR001W GIS2P53849 153 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91 RIP-Chip
LOC1YFR001W RIM20Q12033 661 aa3.11□□□□□ -1.91
LOC1YFR001W GRX6Q12438 231 aa3.11□□□□□ -1.91
LOC1YFR001W MET17P06106 444 aa3.1□□□□□ -1.91
LOC1YFR001W RNA14P25298 677 aaKnown RBP3.1□□□□□ -1.91
LOC1YFR001W RPN12P32496 274 aa3.1□□□□□ -1.91
LOC1YFR001W HXT14P42833 540 aa3.1□□□□□ -1.91
LOC1YFR001W MRPL19P53875 158 aa3.1□□□□□ -1.91
LOC1YFR001W ARK1P53974 638 aa3.1□□□□□ -1.91
LOC1YFR001W RQC1Q05468 723 aaKnown RBP3.1□□□□□ -1.91
LOC1YFR001W COG4Q06096 861 aa3.1□□□□□ -1.91
LOC1YFR001W TSR2Q06672 205 aaKnown RBP3.1□□□□□ -1.91
LOC1YFR001W TLG2Q08144 397 aa3.1□□□□□ -1.91
LOC1YFR001W RRD2Q12461 358 aa3.1□□□□□ -1.91
LOC1YFR001W LPD1P09624 499 aaKnown RBP3.09□□□□□ -1.91
LOC1YFR001W PMR1P13586 950 aa3.09□□□□□ -1.91
LOC1YFR001W FRE2P36033 711 aa3.09□□□□□ -1.91
LOC1YFR001W PCA1P38360 1216 aa3.09□□□□□ -1.91
LOC1YFR001W SMF1P38925 575 aa3.09□□□□□ -1.91
LOC1YFR001W WSC2P53832 503 aa3.09□□□□□ -1.91
LOC1YFR001W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
LOC1YFR001W HNT3Q08702 217 aa3.09□□□□□ -1.91
LOC1YFR001W YLL056CQ12177 298 aa3.09□□□□□ -1.91
LOC1YFR001W RTP1Q12751 981 aa3.09□□□□□ -1.91
LOC1YFR001W CBS2P14905 389 aa3.08□□□□□ -1.92
LOC1YFR001W ATP10P18496 279 aa3.08□□□□□ -1.92
LOC1YFR001W ROX1P25042 368 aa3.08□□□□□ -1.92
LOC1YFR001W RAD14P28519 371 aa3.08□□□□□ -1.92
LOC1YFR001W RSM22P36056 628 aa3.08□□□□□ -1.92
LOC1YFR001W THI2P38141 450 aa3.08□□□□□ -1.92
LOC1YFR001W YBP1P38315 674 aa3.08□□□□□ -1.92
LOC1YFR001W VMA13P41807 478 aaKnown RBP3.08□□□□□ -1.92
LOC1YFR001W MSO1P53604 210 aaKnown RBP3.08□□□□□ -1.92
LOC1YFR001W YCL021W-AQ96VH3 125 aa3.08□□□□□ -1.92
LOC1YFR001W YML133CQ03099 1374 aa3.08□□□□□ -1.92
LOC1YFR001W YLL067CQ07888 1374 aa3.08□□□□□ -1.92
LOC1YFR001W YLL066CQ99208 1374 aa3.08□□□□□ -1.92
LOC1YFR001W LEU4P06208 619 aaKnown RBP3.07□□□□□ -1.92
LOC1YFR001W RHO2P06781 192 aa3.07□□□□□ -1.92
LOC1YFR001W SPB1P25582 841 aaPredicted RBP3.07□□□□□ -1.92
LOC1YFR001W AFG1P32317 509 aa3.07□□□□□ -1.92
LOC1YFR001W AVT5P38176 459 aa3.07□□□□□ -1.92
LOC1YFR001W GCD10P41814 478 aa3.07□□□□□ -1.92
LOC1YFR001W YGR149WP48236 432 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms