RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W YBR056W-AI2HB52 66 aa6.77□□□□□ -1.33
PDA1YER178W CUP1-1P0CX80 61 aa6.77□□□□□ -1.33
PDA1YER178W CUP1-2P0CX81 61 aa6.77□□□□□ -1.33
PDA1YER178W HOP1P20050 605 aa6.77□□□□□ -1.33
PDA1YER178W DAL82P21705 255 aa6.77□□□□□ -1.33
PDA1YER178W NPP1P25353 742 aa6.77□□□□□ -1.33
PDA1YER178W SIP2P34164 415 aaKnown RBP6.77□□□□□ -1.33
PDA1YER178W MEP2P41948 499 aa6.77□□□□□ -1.33
PDA1YER178W UBP6P43593 499 aaKnown RBP6.77□□□□□ -1.33
PDA1YER178W TRS85P46944 698 aa6.77□□□□□ -1.33
PDA1YER178W BNI4P53858 892 aa6.77□□□□□ -1.33
PDA1YER178W GUP2Q08929 609 aa6.77□□□□□ -1.33
PDA1YER178W MCD1Q12158 566 aa6.77□□□□□ -1.33
PDA1YER178W YPT6Q99260 215 aa6.77□□□□□ -1.33
PDA1YER178W MDM35O60200 86 aa6.76□□□□□ -1.33
PDA1YER178W RSR1P13856 272 aa6.76□□□□□ -1.33
PDA1YER178W BUB3P26449 341 aa6.76□□□□□ -1.33
PDA1YER178W FUN30P31380 1131 aa6.76□□□□□ -1.33
PDA1YER178W PRO1P32264 428 aa6.76□□□□□ -1.33
PDA1YER178W YKL100CP34248 587 aa6.76□□□□□ -1.33
PDA1YER178W SQT1P35184 431 aa6.76□□□□□ -1.33
PDA1YER178W YBL029WP38201 376 aa6.76□□□□□ -1.33
PDA1YER178W BMT2P38278 337 aa6.76□□□□□ -1.33
PDA1YER178W GIC1P38785 314 aa6.76□□□□□ -1.33
PDA1YER178W ATG7P38862 630 aa6.76□□□□□ -1.33
PDA1YER178W ARB1P40024 610 aaKnown RBP6.76□□□□□ -1.33
PDA1YER178W CAB2P40506 365 aa6.76□□□□□ -1.33
PDA1YER178W TAF6P53040 516 aa6.76□□□□□ -1.33
PDA1YER178W ESF2P53743 316 aaKnown RBP6.76□□□□□ -1.33
PDA1YER178W YNL260CP53846 198 aa6.76□□□□□ -1.33
PDA1YER178W YET2Q04210 160 aa6.76□□□□□ -1.33
PDA1YER178W YVC1Q12324 675 aa6.76□□□□□ -1.33
PDA1YER178W YCL012CQ8J0M4 134 aa6.76□□□□□ -1.33
PDA1YER178W AI3P03877 415 aa6.75□□□□□ -1.33
PDA1YER178W STE4P18851 423 aa6.75□□□□□ -1.33
PDA1YER178W PRP6P19735 899 aaPredicted RBP6.75□□□□□ -1.33
PDA1YER178W DBR1P24309 405 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W PTP1P25044 335 aa6.75□□□□□ -1.33
PDA1YER178W CHA1P25379 360 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W ADE1P27616 306 aa6.75□□□□□ -1.33
PDA1YER178W IDH2P28241 369 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W HEM3P28789 327 aa6.75□□□□□ -1.33
PDA1YER178W LOS1P33418 1100 aaPredicted RBP6.75□□□□□ -1.33
PDA1YER178W WBP1P33767 430 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W YBR071WP38243 211 aa6.75□□□□□ -1.33
PDA1YER178W BZZ1P38822 633 aa6.75□□□□□ -1.33
PDA1YER178W SCS2P40075 244 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W APQ12P40532 138 aa6.75□□□□□ -1.33
PDA1YER178W MRM2P53123 320 aa6.75□□□□□ -1.33
PDA1YER178W NOP19P53317 196 aaPredicted RBP6.75□□□□□ -1.33
PDA1YER178W YNL010WP53981 241 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W REX2P54964 269 aaKnown RBP6.75□□□□□ -1.33
PDA1YER178W MET31Q03081 177 aa6.75□□□□□ -1.33
PDA1YER178W YDR124WQ04608 324 aa6.75□□□□□ -1.33
PDA1YER178W YLR030WQ07967 263 aa6.75□□□□□ -1.33
PDA1YER178W GYP1Q08484 637 aa6.75□□□□□ -1.33
PDA1YER178W HUA2Q12134 243 aa6.75□□□□□ -1.33
PDA1YER178W JLP1Q12358 412 aa6.75□□□□□ -1.33
PDA1YER178W KAR1P11927 433 aa6.74□□□□□ -1.33
PDA1YER178W MXR2P25566 168 aa6.74□□□□□ -1.33
PDA1YER178W RPC19P28000 142 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W MVD1P32377 396 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W PDR3P33200 976 aa6.74□□□□□ -1.33
PDA1YER178W RPT5P33297 434 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W PET112P33893 541 aa6.74□□□□□ -1.33
PDA1YER178W CAF4P36130 643 aa6.74□□□□□ -1.33
PDA1YER178W YBR238CP38330 731 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W ERP5P38819 212 aa6.74□□□□□ -1.33
PDA1YER178W UTP9P38882 575 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W MNL1P38888 796 aa6.74□□□□□ -1.33
PDA1YER178W VPS41P38959 992 aa6.74□□□□□ -1.33
PDA1YER178W MRX1P40050 688 aa6.74□□□□□ -1.33
PDA1YER178W MNT3P40549 630 aa6.74□□□□□ -1.33
PDA1YER178W RNR4P49723 345 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W NAS6P50086 228 aa6.74□□□□□ -1.33
PDA1YER178W MSC1Q03104 513 aa6.74□□□□□ -1.33
PDA1YER178W TRS23Q03784 219 aa6.74□□□□□ -1.33
PDA1YER178W CDA1Q06702 301 aa6.74□□□□□ -1.33
PDA1YER178W RRP40Q08285 240 aaKnown RBP6.74□□□□□ -1.33
PDA1YER178W MMT2Q08970 484 aa6.74□□□□□ -1.33
PDA1YER178W CAR1P00812 333 aaKnown RBP6.73□□□□□ -1.33
PDA1YER178W ALG7P07286 448 aa6.73□□□□□ -1.33
PDA1YER178W SLM5P25345 492 aaKnown RBP6.73□□□□□ -1.33
PDA1YER178W GBP2P25555 427 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
PDA1YER178W IMG1P25626 169 aa6.73□□□□□ -1.33
PDA1YER178W RAD14P28519 371 aa6.73□□□□□ -1.33
PDA1YER178W COX13P32799 129 aa6.73□□□□□ -1.33
PDA1YER178W EHT1P38295 451 aa6.73□□□□□ -1.33
PDA1YER178W RFC3P38629 340 aa6.73□□□□□ -1.33
PDA1YER178W YEN1P40028 759 aa6.73□□□□□ -1.33
PDA1YER178W MUP1P50276 574 aa6.73□□□□□ -1.33
PDA1YER178W ROG1P53118 685 aa6.73□□□□□ -1.33
PDA1YER178W YGR053CP53234 283 aa6.73□□□□□ -1.33
PDA1YER178W RTS3P53289 263 aa6.73□□□□□ -1.33
PDA1YER178W CUS2P53830 285 aaPredicted RBP6.73□□□□□ -1.33
PDA1YER178W SUB1P54000 292 aaKnown RBP6.73□□□□□ -1.33
PDA1YER178W YPL109CQ02981 657 aa6.73□□□□□ -1.33
PDA1YER178W FMN1Q03778 218 aa6.73□□□□□ -1.33
PDA1YER178W DIC1Q06143 298 aa6.73□□□□□ -1.33
PDA1YER178W NOB1Q08444 459 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms