RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C ROY1Q04847 553 aa3.82□□□□□ -1.8
FCF1YDR339C IRC3Q06683 689 aa3.82□□□□□ -1.8
FCF1YDR339C PGC1Q08959 321 aa3.82□□□□□ -1.8
FCF1YDR339C YPL225WQ08971 146 aaKnown RBP3.82□□□□□ -1.8
FCF1YDR339C MED2Q12124 431 aa3.82□□□□□ -1.8
FCF1YDR339C ATG9Q12142 997 aa3.82□□□□□ -1.8
FCF1YDR339C SKS1Q12505 502 aa3.82□□□□□ -1.8
FCF1YDR339C YRF1-1P0CX20 1796 aa3.81□□□□□ -1.8
FCF1YDR339C YRF1-5P0CX21 1796 aa3.81□□□□□ -1.8
FCF1YDR339C YRF1-8P0CX22 1796 aa3.81□□□□□ -1.8
FCF1YDR339C ADE6P38972 1358 aaKnown RBP3.81□□□□□ -1.8
FCF1YDR339C AQY1P0CD91 305 aa3.81□□□□□ -1.8
FCF1YDR339C NAT1P12945 854 aaKnown RBP3.81□□□□□ -1.8
FCF1YDR339C PMA2P19657 947 aa3.81□□□□□ -1.8
FCF1YDR339C BOS1P25385 244 aa3.81□□□□□ -1.8
FCF1YDR339C PTC6P25646 442 aa3.81□□□□□ -1.8
FCF1YDR339C RFT1P38206 574 aaPredicted RBP3.81□□□□□ -1.8
FCF1YDR339C NTC20P38302 140 aaPredicted RBP3.81□□□□□ -1.8
FCF1YDR339C SGN1P40561 250 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
FCF1YDR339C MAF1P41910 395 aa3.81□□□□□ -1.8
FCF1YDR339C CTK3P46963 296 aaPredicted RBP3.81□□□□□ -1.8
FCF1YDR339C FMS1P50264 508 aa3.81□□□□□ -1.8
FCF1YDR339C YGL242CP53066 181 aa3.81□□□□□ -1.8
FCF1YDR339C MLC1P53141 149 aa3.81□□□□□ -1.8
FCF1YDR339C CUL3P53202 744 aa3.81□□□□□ -1.8
FCF1YDR339C RPA49Q01080 415 aaPredicted RBP3.81□□□□□ -1.8
FCF1YDR339C YMR178WQ03219 274 aaKnown RBP3.81□□□□□ -1.8
FCF1YDR339C RRB1Q04225 511 aaKnown RBP3.81□□□□□ -1.8
FCF1YDR339C SOV1Q04748 898 aa3.81□□□□□ -1.8
FCF1YDR339C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
FCF1YDR339C RLM1Q12224 676 aa3.81□□□□□ -1.8
FCF1YDR339C CTF3Q12748 733 aa3.81□□□□□ -1.8
FCF1YDR339C RPL7AP05737 244 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C RPL22AP05749 121 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C APE1P14904 514 aa3.8□□□□□ -1.8
FCF1YDR339C BUD14P27637 709 aa3.8□□□□□ -1.8
FCF1YDR339C PIM1P36775 1133 aa3.8□□□□□ -1.8
FCF1YDR339C ADE17P38009 592 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C ELO1P39540 310 aa3.8□□□□□ -1.8
FCF1YDR339C TDA10P42938 290 aa3.8□□□□□ -1.8
FCF1YDR339C IPI3P53877 555 aa3.8□□□□□ -1.8
FCF1YDR339C VTC3Q02725 835 aa3.8□□□□□ -1.8
FCF1YDR339C YDR341CQ05506 607 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C YDR286CQ05530 114 aa3.8□□□□□ -1.8
FCF1YDR339C RRP45Q05636 305 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C HCR1Q05775 265 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C SPE3Q12074 293 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C RPL7BQ12213 244 aaKnown RBP3.8□□□□□ -1.8
FCF1YDR339C YDL007C-AQ2V2Q0 85 aa3.8□□□□□ -1.8
FCF1YDR339C BRR1Q99177 341 aaPredicted RBP3.8□□□□□ -1.8
FCF1YDR339C CYB2P00175 591 aa3.79□□□□□ -1.8
FCF1YDR339C STF1P01098 86 aa3.79□□□□□ -1.8
FCF1YDR339C BI2P03873 423 aa3.79□□□□□ -1.8
FCF1YDR339C HEM1P09950 548 aaPredicted RBP3.79□□□□□ -1.8
FCF1YDR339C YML002WP0CF17 737 aa3.79□□□□□ -1.8
FCF1YDR339C MATALPHA2P0CY08 210 aa3.79□□□□□ -1.8
FCF1YDR339C HMLALPHA2P0CY09 210 aa3.79□□□□□ -1.8
FCF1YDR339C RPL3P14126 387 aaKnown RBP3.79□□□□□ -1.8
FCF1YDR339C PHO13P19881 312 aa3.79□□□□□ -1.8
FCF1YDR339C MRPS28P21771 286 aa3.79□□□□□ -1.8
FCF1YDR339C SEC14P24280 304 aaKnown RBP3.79□□□□□ -1.8
FCF1YDR339C BUD5P25300 642 aaPredicted RBP3.79□□□□□ -1.8
FCF1YDR339C BRF1P29056 596 aa3.79□□□□□ -1.8
FCF1YDR339C YME2P32843 850 aa3.79□□□□□ -1.8
FCF1YDR339C RGT1P32862 1170 aa3.79□□□□□ -1.8
FCF1YDR339C YBL055CP34220 418 aaPredicted RBP3.79□□□□□ -1.8
FCF1YDR339C NUP133P36161 1157 aa3.79□□□□□ -1.8
FCF1YDR339C MNN2P38069 597 aa3.79□□□□□ -1.8
FCF1YDR339C PCH2P38126 564 aa3.79□□□□□ -1.8
FCF1YDR339C MSR1P38714 643 aa3.79□□□□□ -1.8
FCF1YDR339C DBP8P38719 431 aa3.79□□□□□ -1.8
FCF1YDR339C YHR054CP38780 354 aa3.79□□□□□ -1.8
FCF1YDR339C POP2P39008 433 aa3.79□□□□□ -1.8
FCF1YDR339C ERG26P53199 349 aaKnown RBP3.79□□□□□ -1.8
FCF1YDR339C YGR111WP53265 400 aa3.79□□□□□ -1.8
FCF1YDR339C CAF130P53280 1122 aaPredicted RBP3.79□□□□□ -1.8
FCF1YDR339C SKO1Q02100 647 aa3.79□□□□□ -1.8
FCF1YDR339C RSF1Q05043 376 aa3.79□□□□□ -1.8
FCF1YDR339C HRD3Q05787 833 aa3.79□□□□□ -1.8
FCF1YDR339C STE23Q06010 1027 aa3.79□□□□□ -1.8
FCF1YDR339C FMP45Q07651 309 aa3.79□□□□□ -1.8
FCF1YDR339C PCL8Q08966 492 aa3.79□□□□□ -1.8
FCF1YDR339C CFT2Q12102 859 aaPredicted RBP3.79□□□□□ -1.8
FCF1YDR339C YLR049CQ12110 428 aa3.79□□□□□ -1.8
FCF1YDR339C ARG81P05085 880 aa3.78□□□□□ -1.8
FCF1YDR339C RPL6BP05739 176 aaKnown RBP3.78□□□□□ -1.8
FCF1YDR339C SPS4P09937 338 aa3.78□□□□□ -1.8
FCF1YDR339C RAP1P11938 827 aa3.78□□□□□ -1.8
FCF1YDR339C KRS1P15180 591 aaKnown RBP3.78□□□□□ -1.8
FCF1YDR339C SRV2P17555 526 aaKnown RBP3.78□□□□□ -1.8
FCF1YDR339C RAD51P25454 400 aa3.78□□□□□ -1.8
FCF1YDR339C SPB1P25582 841 aaPredicted RBP3.78□□□□□ -1.8
FCF1YDR339C MSS51P32335 436 aa3.78□□□□□ -1.8
FCF1YDR339C DPH2P32461 534 aa3.78□□□□□ -1.8
FCF1YDR339C RPC34P32910 317 aa3.78□□□□□ -1.8
FCF1YDR339C TIF3P34167 436 aaKnown RBP3.78□□□□□ -1.8
FCF1YDR339C UIP5P36137 443 aa3.78□□□□□ -1.8
FCF1YDR339C DAD2P36162 133 aa3.78□□□□□ -1.8
FCF1YDR339C YSW1P38280 609 aa3.78□□□□□ -1.8
FCF1YDR339C TSC10P38342 320 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms