RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RFS1P38234 210 aaKnown RBP2.66□□□□□ -1.98
SNU56YDR240C MUM2P38236 366 aa2.66□□□□□ -1.98
SNU56YDR240C MSR1P38714 643 aa2.66□□□□□ -1.98
SNU56YDR240C NDT80P38830 627 aa2.66□□□□□ -1.98
SNU56YDR240C FAU1P40099 211 aa2.66□□□□□ -1.98
SNU56YDR240C LYS14P40971 790 aa2.66□□□□□ -1.98
SNU56YDR240C URB2P47108 1174 aa2.66□□□□□ -1.98
SNU56YDR240C OGG1P53397 376 aaPredicted RBP2.66□□□□□ -1.98
SNU56YDR240C ELP3Q02908 557 aaKnown RBP2.66□□□□□ -1.98
SNU56YDR240C PBA1Q05778 276 aa2.66□□□□□ -1.98
SNU56YDR240C ESA1Q08649 445 aa2.66□□□□□ -1.98
SNU56YDR240C ELO2P25358 347 aa2.65□□□□□ -1.98
SNU56YDR240C HXT1P32465 570 aa2.65□□□□□ -1.98
SNU56YDR240C NOP4P37838 685 aaKnown RBP2.65□□□□□ -1.98
SNU56YDR240C REE1P40893 198 aa2.65□□□□□ -1.98
SNU56YDR240C YFL067WP43537 175 aa2.65□□□□□ -1.98
SNU56YDR240C LCL3P53153 274 aa2.65□□□□□ -1.98
SNU56YDR240C IPI3P53877 555 aa2.65□□□□□ -1.98
SNU56YDR240C IBD2P53892 351 aa2.65□□□□□ -1.98
SNU56YDR240C PIR3Q03180 325 aa2.65□□□□□ -1.98
SNU56YDR240C SEM1O94742 89 aa2.65□□□□□ -1.99
SNU56YDR240C EST1P17214 699 aaPredicted RBP2.65□□□□□ -1.99
SNU56YDR240C ISY1P21374 235 aaPredicted RBP2.65□□□□□ -1.99
SNU56YDR240C TRX2P22803 104 aaKnown RBP2.65□□□□□ -1.99
SNU56YDR240C SPR1P32603 445 aa2.65□□□□□ -1.99
SNU56YDR240C RSM22P36056 628 aa2.65□□□□□ -1.99
SNU56YDR240C IMD4P50094 524 aaKnown RBP2.65□□□□□ -1.99
SNU56YDR240C YGR066CP53242 292 aa2.65□□□□□ -1.99
SNU56YDR240C ZPR1P53303 486 aaKnown RBP2.65□□□□□ -1.99
SNU56YDR240C NGL3Q03210 505 aa2.65□□□□□ -1.99
SNU56YDR240C YJR112W-AQ3E743 109 aa2.65□□□□□ -1.99
SNU56YDR240C RAV1P47104 1357 aa2.64□□□□□ -1.99
SNU56YDR240C SEC53P07283 254 aaKnown RBP2.64□□□□□ -1.99
SNU56YDR240C PRD1P25375 712 aa2.64□□□□□ -1.99
SNU56YDR240C BUB3P26449 341 aa2.64□□□□□ -1.99
SNU56YDR240C NDI1P32340 513 aa2.64□□□□□ -1.99
SNU56YDR240C SDH3P33421 198 aa2.64□□□□□ -1.99
SNU56YDR240C TCD2P36101 447 aaKnown RBP2.64□□□□□ -1.99
SNU56YDR240C PTH1P38876 190 aaKnown RBP2.64□□□□□ -1.99
SNU56YDR240C ERP2P39704 215 aa2.64□□□□□ -1.99
SNU56YDR240C YIL067CP40514 678 aa2.64□□□□□ -1.99
SNU56YDR240C GCD10P41814 478 aa2.64□□□□□ -1.99
SNU56YDR240C ARK1P53974 638 aa2.64□□□□□ -1.99
SNU56YDR240C RCN2Q12044 265 aa2.64□□□□□ -1.99
SNU56YDR240C COR1P07256 457 aa2.63□□□□□ -1.99
SNU56YDR240C FRE2P36033 711 aa2.63□□□□□ -1.99
SNU56YDR240C RRT5P43607 289 aa2.63□□□□□ -1.99
SNU56YDR240C MHR1Q06630 226 aa2.63□□□□□ -1.99
SNU56YDR240C RRG7Q08774 242 aaPredicted RBP2.63□□□□□ -1.99
SNU56YDR240C TMS1Q12116 473 aa2.63□□□□□ -1.99
SNU56YDR240C RLM1Q12224 676 aa2.63□□□□□ -1.99
SNU56YDR240C AVL9Q12500 764 aa2.63□□□□□ -1.99
SNU56YDR240C MES1P00958 751 aaKnown RBP2.62□□□□□ -1.99
SNU56YDR240C MCM10P32354 571 aa2.62□□□□□ -1.99
SNU56YDR240C PAH1P32567 862 aa2.62□□□□□ -1.99
SNU56YDR240C GLC7P32598 312 aaKnown RBP2.62□□□□□ -1.99
SNU56YDR240C NAT2P37293 288 aa2.62□□□□□ -1.99
SNU56YDR240C SRO77P38163 1010 aa2.62□□□□□ -1.99
SNU56YDR240C SLX1P38324 304 aa2.62□□□□□ -1.99
SNU56YDR240C MTC6P38849 526 aa2.62□□□□□ -1.99
SNU56YDR240C MBB1P39534 108 aa2.62□□□□□ -1.99
SNU56YDR240C NOP16P40007 231 aaKnown RBP2.62□□□□□ -1.99
SNU56YDR240C AVT4P50944 713 aa2.62□□□□□ -1.99
SNU56YDR240C ART5P53244 586 aaKnown RBP2.62□□□□□ -1.99
SNU56YDR240C RTS3P53289 263 aa2.62□□□□□ -1.99
SNU56YDR240C THP3Q12049 470 aaKnown RBP2.62□□□□□ -1.99
SNU56YDR240C DFR1P07807 211 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SNU56YDR240C CHS1P08004 1131 aa2.61□□□□□ -1.99
SNU56YDR240C CPR4P25334 318 aa2.61□□□□□ -1.99
SNU56YDR240C ATP11P32453 318 aa2.61□□□□□ -1.99
SNU56YDR240C PRS1P32895 427 aaKnown RBP2.61□□□□□ -1.99
SNU56YDR240C WBP1P33767 430 aaKnown RBP2.61□□□□□ -1.99
SNU56YDR240C MUD2P36084 527 aaKnown RBP2.61□□□□□ -1.99
SNU56YDR240C SLG1P54867 378 aa2.61□□□□□ -1.99
SNU56YDR240C ODC1Q03028 310 aa2.61□□□□□ -1.99
SNU56YDR240C VPS38Q05919 439 aa2.61□□□□□ -1.99
SNU56YDR240C CTI6Q08923 506 aa2.61□□□□□ -1.99
SNU56YDR240C YLR108CQ12259 485 aa2.61□□□□□ -1.99
SNU56YDR240C HRT3Q12347 344 aa2.61□□□□□ -1.99
SNU56YDR240C RKM5Q12367 367 aa2.61□□□□□ -1.99
SNU56YDR240C CBP4P37267 147 aa2.6□□□□□ -1.99
SNU56YDR240C REG2P38232 338 aa2.6□□□□□ -1.99
SNU56YDR240C POP6P53218 158 aa2.6□□□□□ -1.99
SNU56YDR240C YLR152CP54072 576 aa2.6□□□□□ -1.99
SNU56YDR240C SOV1Q04748 898 aa2.6□□□□□ -1.99
SNU56YDR240C MFB1Q04922 465 aa2.6□□□□□ -1.99
SNU56YDR240C TMC1Q08422 150 aaPredicted RBP2.6□□□□□ -1.99
SNU56YDR240C LEU4P06208 619 aaKnown RBP2.59□□□□□ -1.99
SNU56YDR240C SPS22P25380 463 aa2.59□□□□□ -1.99
SNU56YDR240C MIX23P38162 196 aa2.59□□□□□ -1.99
SNU56YDR240C SYG1P40528 902 aa2.59□□□□□ -1.99
SNU56YDR240C SSN8P47821 323 aa2.59□□□□□ -1.99
SNU56YDR240C PNG1Q02890 363 aa2.59□□□□□ -1.99
SNU56YDR240C MRP51Q02950 344 aa2.59□□□□□ -1.99
SNU56YDR240C TSR1Q07381 788 aaKnown RBP2.59□□□□□ -1.99
SNU56YDR240C YPL199CQ08954 240 aa2.59□□□□□ -1.99
SNU56YDR240C SOD1P00445 154 aaKnown RBP2.58□□□□□ -2
SNU56YDR240C GAL80P04387 435 aa2.58□□□□□ -2
SNU56YDR240C NAT1P12945 854 aaKnown RBP2.58□□□□□ -2
SNU56YDR240C YCR100CP25606 316 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms