RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	PXL1	P36166	706 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	ERV46	P39727	415 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	JHD1	P40034	492 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	NDE1	P40215	560 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	ESL1	P40456	1118 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	SHQ1	P40486	507 aa	Predicted RBP	4.65	□□□□□ -1.67
NUP42	YDR192C	YJL107C	P42947	387 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	RIP-Chip
NUP42	YDR192C	DIA3	P52290	468 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	NBP1	P52919	319 aa	Predicted RBP	4.65	□□□□□ -1.67
NUP42	YDR192C	YGL036W	P53185	909 aa	Predicted RBP	4.65	□□□□□ -1.67
NUP42	YDR192C	CAF130	P53280	1122 aa	Predicted RBP	4.65	□□□□□ -1.67
NUP42	YDR192C	RBG2	P53295	368 aa	Known RBP	4.65	□□□□□ -1.67
NUP42	YDR192C	VTC3	Q02725	835 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	BUD22	Q04347	519 aa	Known RBP	4.65	□□□□□ -1.67
NUP42	YDR192C	SWF1	Q04629	336 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	PDR8	Q06149	701 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	MLH2	Q07980	695 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	APL4	Q12028	832 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	ERP3	Q12403	225 aa		4.65	□□□□□ -1.67
NUP42	YDR192C	PWP1	P21304	576 aa	Known RBP	4.64	□□□□□ -1.67
NUP42	YDR192C	YIH1	P25637	258 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	SAC1	P32368	623 aa	Known RBP	4.64	□□□□□ -1.67
NUP42	YDR192C	LTV1	P34078	463 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	UBP11	P36026	717 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	SNU114	P36048	1008 aa	Known RBP	4.64	□□□□□ -1.67
NUP42	YDR192C	CCT4	P39078	528 aa	Known RBP	4.64	□□□□□ -1.67
NUP42	YDR192C	YMR124W	P39523	943 aa	Known RBP	4.64	□□□□□ -1.67
NUP42	YDR192C	BUR6	P40096	142 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	LTP1	P40347	161 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	ARF3	P40994	183 aa	RIP-Chip data	4.64	□□□□□ -1.67	RIP-Chip
NUP42	YDR192C	YGR127W	P53275	312 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	TIM8	P57744	87 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	PFA5	Q03289	374 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	ARP9	Q05123	467 aa		4.64	□□□□□ -1.67
NUP42	YDR192C	SGT2	Q12118	346 aa	Known RBP	4.64	□□□□□ -1.67
NUP42	YDR192C	QCR6	P00127	147 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	CDC8	P00572	216 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	CDC33	P07260	213 aa	Known RBP	4.63	□□□□□ -1.67
NUP42	YDR192C	SPO12	P17123	173 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	NUP1	P20676	1076 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	YCR006C	P25350	157 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	OCA4	P25366	362 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	HXT1	P32465	570 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	MUD1	P32605	298 aa	Known RBP	4.63	□□□□□ -1.67
NUP42	YDR192C	PCH2	P38126	564 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	ULP2	P40537	1034 aa	Predicted RBP	4.63	□□□□□ -1.67
NUP42	YDR192C	YFR020W	P43600	232 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	RMD8	P43620	662 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	FAR3	P46671	204 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	GLO1	P50107	326 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	YGR066C	P53242	292 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	NNF2	P53253	936 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	RTT102	P53330	157 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	YMR178W	Q03219	274 aa	Known RBP	4.63	□□□□□ -1.67
NUP42	YDR192C	ECM7	Q06200	448 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	PIG1	Q06216	648 aa		4.63	□□□□□ -1.67
NUP42	YDR192C	RIO1	Q12196	484 aa	Known RBP	4.63	□□□□□ -1.67
NUP42	YDR192C	MET8	P15807	274 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	SWI3	P32591	825 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	PEX2	P32800	271 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	RPC25	P35718	212 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	KDX1	P36005	433 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	MMS4	P38257	691 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	YBR225W	P38321	900 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	NDT80	P38830	627 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	RTT107	P38850	1070 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	ALD5	P40047	520 aa	Known RBP	4.62	□□□□□ -1.67
NUP42	YDR192C	EFM4	P40516	257 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	RPC17	P47076	161 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	RPS7B	P48164	190 aa	Known RBP	4.62	□□□□□ -1.67
NUP42	YDR192C	HSH155	P49955	971 aa	Known RBP	4.62	□□□□□ -1.67
NUP42	YDR192C	HOP2	P53187	214 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	CUL3	P53202	744 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	RIM13	Q03792	727 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	SPC19	Q03954	165 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	COQ9	Q05779	260 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	YOL075C	Q08234	1294 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	IES4	Q08561	116 aa		4.62	□□□□□ -1.67
NUP42	YDR192C	APL5	Q08951	932 aa	Known RBP	4.62	□□□□□ -1.67
NUP42	YDR192C	FMP40	Q08968	688 aa	Predicted RBP	4.62	□□□□□ -1.67
NUP42	YDR192C	LEU9	Q12166	604 aa	Known RBP	4.62	□□□□□ -1.67
NUP42	YDR192C	MF(ALPHA)1	P01149	165 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	KAR3	P17119	729 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	RPO26	P20435	155 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	STE50	P25344	346 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	RPC37	P36121	282 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	MRX3	P38172	270 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	AFG3	P39925	761 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	CFD1	P40558	293 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	IRC6	P43615	237 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	KAP114	P53067	1004 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	DRN1	P53255	507 aa	Known RBP	4.61	□□□□□ -1.67
NUP42	YDR192C	BTN2	P53286	410 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	CWC22	P53333	577 aa	Known RBP	4.61	□□□□□ -1.67
NUP42	YDR192C	RSC9	Q03124	581 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	TDA9	Q04545	1251 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	YEH1	Q07804	573 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	APC5	Q08683	685 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	RUD3	Q12234	484 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms